Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 EI24P3-201ENST00000399046 1062 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AL133270.1-201ENST00000402635 279 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AL133388.1-201ENST00000404509 287 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AL009179.1-201ENST00000406085 265 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM38O00635 RN7SKP216-201ENST00000411050 312 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 GSTM3P2-201ENST00000412746 530 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC073069.1-201ENST00000428657 441 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM38O00635 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 CEACAMP7-201ENST00000444105 496 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 NDUFA5P9-201ENST00000472609 340 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 BX284632.1-201ENST00000478218 541 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AL049874.2-201ENST00000492636 288 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.37□□□□□ -1.55
TRIM38O00635 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.37□□□□□ -1.55
TRIM38O00635 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC090425.2-201ENST00000608818 501 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AL121890.2-201ENST00000617644 465 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AC016717.3-201ENST00000624730 554 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 AC092608.3-201ENST00000625017 386 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 BX649567.1-201ENST00000642071 1134 ntBASIC5.37□□□□□ -1.55
TRIM38O00635 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.37□□□□□ -1.55
TRIM38O00635 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
TRIM38O00635 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TRIM38O00635 OR9K1P-202ENST00000641111 3217 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 AC022031.1-201ENST00000585985 2593 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 AC008549.2-201ENST00000333482 706 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 RNU1-146P-201ENST00000364015 165 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 SNORA67-201ENST00000384423 137 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 MIR525-201ENST00000384978 85 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AL645733.1-201ENST00000402250 217 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 SNORA11C-201ENST00000408532 129 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 MIR1303-201ENST00000408625 86 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 Y_RNA.625-201ENST00000411256 107 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 RPS7P9-201ENST00000414704 586 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AL031779.1-201ENST00000415663 330 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 MTND4P3-201ENST00000417829 541 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 RIMKLBP2-201ENST00000424737 654 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TRIM38O00635 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 TPMTP4-201ENST00000450749 678 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC244505.3-201ENST00000454598 187 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC091685.2-201ENST00000454924 864 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 RPL23AP37-201ENST00000479658 549 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 RPL21P131-201ENST00000497298 483 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC091912.1-201ENST00000511351 248 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 RNU6-941P-201ENST00000516346 108 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM38O00635 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.36□□□□□ -1.55
TRIM38O00635 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.36□□□□□ -1.55
TRIM38O00635 PMS2P3-207ENST00000529061 717 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 OR5AM1P-201ENST00000532136 1032 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.36□□□□□ -1.55
TRIM38O00635 AL390726.5-202ENST00000564800 256 ntBASIC5.36□□□□□ -1.55
TRIM38O00635 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.36□□□□□ -1.55
TRIM38O00635 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms