Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 CABYRP1-201ENST00000465493 1045 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 RN7SL814P-201ENST00000487715 300 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 IGBP1P4-201ENST00000503202 879 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 SETP12-201ENST00000514068 805 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 RNU6-347P-201ENST00000516658 105 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 MORF4L1P3-201ENST00000525966 950 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 NOP56P3-201ENST00000549457 385 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AL109741.3-201ENST00000561748 592 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC00557-201ENST00000563184 1279 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 MIR4715-201ENST00000584117 79 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC108738.1-201ENST00000603703 237 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC090525.3-201ENST00000605601 189 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC092653.1-201ENST00000608509 531 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC010632.3-201ENST00000611377 369 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC016957.2-201ENST00000616998 848 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AC020923.1-201ENST00000624021 917 ntBASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.8□□□□□ -1.64
PCDHGA1Q9Y5H4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 Z95327.2-201ENST00000414579 1873 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC024341.1-201ENST00000526444 1552 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC091046.3-201ENST00000631455 1574 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 ZNF90P1-201ENST00000480493 1951 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 RN7SKP227-201ENST00000364445 330 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 SNORA77-201ENST00000408716 125 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC114755.2-201ENST00000413520 361 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC019070.1-201ENST00000415008 1024 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC073464.3-201ENST00000422564 712 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 MTND4P24-201ENST00000424002 397 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 RSL24D1P6-201ENST00000426934 401 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 NPM1P24-201ENST00000428039 894 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC073069.1-201ENST00000428657 441 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AL357520.1-201ENST00000441557 453 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 HMGB1P5-202ENST00000451497 985 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 RPS5P7-201ENST00000456664 608 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC107398.1-201ENST00000486904 505 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC111193.1-201ENST00000504097 155 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 RN7SKP122-201ENST00000515923 296 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 CBX3P2-202ENST00000583365 535 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC020910.2-201ENST00000603635 610 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC093765.1-201ENST00000603758 881 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AC098935.2-201ENST00000604222 466 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 BNIP3P35-201ENST00000604530 490 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AP004607.9-201ENST00000618202 316 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AL356094.1-201ENST00000624663 1212 ntBASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
PCDHGA1Q9Y5H4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 AC073136.1-201ENST00000449426 2884 ntBASIC4.78□□□□□ -1.64
PCDHGA1Q9Y5H4 SNORA62.2-201ENST00000364672 152 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms