Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MTCO3P42-201ENST00000509488 518 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 MTCO3P39-201ENST00000514812 518 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 RNA5SP446-201ENST00000515955 82 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC022790.1-201ENST00000522872 204 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 OR5AZ1P-201ENST00000527448 943 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 MIR5699-201ENST00000578903 90 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 FAM27B-201ENST00000610601 213 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AC243654.2-201ENST00000612843 443 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AL136164.3-201ENST00000624429 3978 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 NCLP2-201ENST00000416078 1462 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 AL136964.1-201ENST00000622038 2990 ntBASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RHBDD3Q9Y3P4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.09□□□□□ -1.76
RHBDD3Q9Y3P4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RHBDD3Q9Y3P4 AL031119.1-201ENST00000404707 1879 ntBASIC4.09□□□□□ -1.76
RHBDD3Q9Y3P4 SAGE2P-201ENST00000420011 2126 ntBASIC4.09□□□□□ -1.76
RHBDD3Q9Y3P4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 RNA5SP151-201ENST00000365632 117 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 MIR323B-201ENST00000385269 82 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 RNU1-82P-201ENST00000390851 165 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AL590762.2-201ENST00000395798 571 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 GSTA12P-201ENST00000402398 508 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC004690.1-201ENST00000418216 328 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 PPIAP13-201ENST00000434706 478 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 PSMD10P3-201ENST00000437000 448 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC005008.1-201ENST00000456151 612 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 S100A11P1-201ENST00000477525 312 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC004453.1-201ENST00000487895 408 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC091868.1-201ENST00000508746 304 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC021146.7-201ENST00000509604 775 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 OR7E10P-201ENST00000526420 991 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC021006.3-201ENST00000530771 192 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 NPM1P47-201ENST00000560843 856 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC090229.1-201ENST00000590983 1609 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AC067931.1-201ENST00000624190 671 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AP000843.1-201ENST00000624880 701 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 AP001002.1-201ENST00000625148 1513 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.08□□□□□ -1.76
RHBDD3Q9Y3P4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC017104.4-201ENST00000636283 1592 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AL359715.4-201ENST00000606629 1436 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 OR51C1P-202ENST00000641159 1444 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 SNORA51.8-201ENST00000384234 132 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 RNA5SP372-201ENST00000390836 115 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 TXNP2-201ENST00000443918 295 ntBASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.07□□□□□ -1.76
RHBDD3Q9Y3P4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms