Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 LINC01355-201ENST00000566551 5444 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC010300.1-201ENST00000600671 5134 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AL161909.1-201ENST00000397390 712 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC004690.1-201ENST00000418216 328 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 RPS26P28-201ENST00000470806 348 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC108475.1-201ENST00000507880 950 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 STMN1P2-201ENST00000508435 439 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 PARP4P3-201ENST00000510265 317 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 KCTD9P2-201ENST00000512203 1013 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC021733.2-201ENST00000518830 497 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 OR7M1P-201ENST00000608946 533 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AL121890.2-201ENST00000617644 465 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 MIR3653-201ENST00000625572 110 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC055839.1-201ENST00000634467 498 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 AC019072.1-201ENST00000604535 1551 ntBASIC4.52□□□□□ -1.69
CISHQ9NSE2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CISHQ9NSE2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CISHQ9NSE2 SAMMSON-213ENST00000641336 1521 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 VDAC2P1-201ENST00000399358 958 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 AL035696.2-201ENST00000407941 709 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 MIR1179-201ENST00000408703 91 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 RNA5SP146-201ENST00000410743 123 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 SETP10-201ENST00000424368 814 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 RPL7AP52-201ENST00000458096 790 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 AC109327.1-201ENST00000471666 403 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 UQCRHP4-201ENST00000471686 272 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 PPBPP1-201ENST00000510807 373 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 AL121834.1-201ENST00000572284 509 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 KPNA2P3-201ENST00000584190 848 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.51□□□□□ -1.69
CISHQ9NSE2 AC006272.2-201ENST00000594725 163 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 IPO5P1-202ENST00000600039 287 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 MLECP1-201ENST00000615893 709 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 Z95327.2-201ENST00000414579 1873 ntBASIC4.51□□□□□ -1.69
CISHQ9NSE2 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CISHQ9NSE2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 OR6C69P-201ENST00000394268 893 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CISHQ9NSE2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 HMGB1P32-201ENST00000425971 565 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 HPRT1P1-201ENST00000509498 657 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AC007066.2-202ENST00000566531 914 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 MTND6P33-201ENST00000571794 183 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.5□□□□□ -1.69
CISHQ9NSE2 AC005962.2-201ENST00000611427 652 ntBASIC4.5□□□□□ -1.69
CISHQ9NSE2 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms