Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MTND4P2-201ENST00000507767 1203 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 DUTP7-201ENST00000507982 486 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC091912.1-201ENST00000511351 248 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 SCARNA6.1-201ENST00000516989 238 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 HMGN2P36-201ENST00000529541 409 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC092747.2-201ENST00000545069 983 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC008083.2-201ENST00000546707 476 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC079171.1-201ENST00000568788 914 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 OR7E18P-201ENST00000592589 702 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP002884.5-201ENST00000595053 1132 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC010738.1-201ENST00000604970 987 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC009163.6-201ENST00000612367 342 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP003497.2-201ENST00000624220 967 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 MIR4278-201ENST00000636094 69 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 GTF2IP4-201ENST00000453092 2054 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AP000776.1-201ENST00000530032 1663 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL078621.3-201ENST00000623707 2042 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC091305.2-201ENST00000624049 1576 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC073429.2-201ENST00000569694 1444 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-707P-201ENST00000364647 95 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL355379.1-201ENST00000405542 640 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RPS3AP2-201ENST00000407190 754 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-575P-201ENST00000411326 105 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 PAICSP7-201ENST00000419829 962 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 GTF2IP23-201ENST00000423746 351 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AP001324.1-201ENST00000428553 399 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 MTCO1P3-201ENST00000429327 192 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RPS27P18-201ENST00000431701 247 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 CACYBPP1-201ENST00000438592 684 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC009263.1-201ENST00000441193 1239 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 MTND3P1-201ENST00000441336 220 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RPS26P30-201ENST00000443431 335 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL606662.1-201ENST00000445763 553 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 HMGN1P36-201ENST00000446623 298 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 RPS17P15-201ENST00000475609 349 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC104687.1-201ENST00000485829 412 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC080014.1-201ENST00000496877 1201 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC104090.1-201ENST00000506341 1171 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC008837.2-201ENST00000513076 418 ntBASIC5.17□□□□□ -1.58
AMBRA1Q9C0C7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 328.6 ms