Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AC087783.2-201ENST00000605070 562 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AC026979.4-201ENST00000606555 645 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AL049539.1-201ENST00000611964 459 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AL627230.1-201ENST00000613077 211 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 AL591926.8-201ENST00000616876 211 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 CR381572.2-201ENST00000624852 397 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 MTCO1P18-201ENST00000455518 1419 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 MFSD8-220ENST00000641243 1422 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 HSP90AA5P-201ENST00000438353 2192 ntBASIC6.47□□□□□ -1.37
CHMP4AQ9BY43 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CHMP4AQ9BY43 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AL035079.1-201ENST00000405210 287 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 HYALP1-201ENST00000417674 1279 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC008065.1-201ENST00000428525 348 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 RPS7P5-201ENST00000441482 581 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 YWHAQP9-201ENST00000445891 512 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC005412.2-201ENST00000492004 341 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 RPSAP51-201ENST00000497462 645 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 NDUFA5P12-201ENST00000503796 343 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC005351.1-201ENST00000511152 786 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 SNORA76.2-201ENST00000517095 137 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AL354696.1-201ENST00000614652 497 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 ATE1-AS1-202ENST00000636460 506 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 AC104623.2-202ENST00000623477 4002 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 SEC63P2-201ENST00000503863 1939 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 Z95331.1-201ENST00000623075 23112 ntBASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHMP4AQ9BY43 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AL133243.3-201ENST00000617415 3004 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 MIR708-201ENST00000390708 88 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 SNORA77-201ENST00000408716 125 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 ELOCP6-201ENST00000429066 328 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 ARL5AP2-201ENST00000444698 533 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 IGHV5-78-201ENST00000450948 295 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 PRPF38AP1-201ENST00000451976 933 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 ELOCP12-201ENST00000458706 328 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 RNA5SP497-201ENST00000516081 97 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 Y_RNA.719-201ENST00000517156 106 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 OR5AK3P-201ENST00000527486 1297 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 OR8A2P-201ENST00000528631 952 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LSM3P2-201ENST00000551246 273 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 AC125494.3-201ENST00000602759 455 ntBASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CHMP4AQ9BY43 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.44□□□□□ -1.38
CHMP4AQ9BY43 RNA5SP123-201ENST00000363244 119 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms