Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC027369.5-201ENST00000533838 755 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC024940.3-201ENST00000538551 316 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 CYP2C60P-201ENST00000566088 139 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AP005262.1-201ENST00000582646 997 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC090525.3-201ENST00000605601 189 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC090527.3-201ENST00000619041 548 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 Z99129.2-201ENST00000619967 314 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AP002967.1-201ENST00000624203 539 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 FRG1EP-201ENST00000634469 770 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 SEC63P2-201ENST00000503863 1939 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC104623.2-202ENST00000623477 4002 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MAPK10-328ENST00000641553 4009 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO1P11-201ENST00000429111 1528 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 OR9K1P-201ENST00000326513 941 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 RNA5SP187-201ENST00000384400 119 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AL390316.1-201ENST00000406279 553 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 RPS3AP37-201ENST00000419176 745 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO3P21-201ENST00000430791 643 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 MTATP6P26-201ENST00000445926 662 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 PRPF38AP1-201ENST00000451976 933 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC110749.1-201ENST00000462007 357 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC091180.1-201ENST00000462104 372 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC068714.1-201ENST00000559623 800 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC009097.3-201ENST00000563557 1018 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC095057.3-201ENST00000567102 1157 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AL137072.1-201ENST00000603444 466 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC022467.1-201ENST00000614738 749 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 BNIP3P41-202ENST00000616656 861 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC120349.3-201ENST00000624377 529 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC090897.3-201ENST00000636973 1157 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 MTND2P41-201ENST00000637599 773 ntBASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CDK5RAP3Q96JB5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC002525.1-201ENST00000624392 1622 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 BX005019.1-201ENST00000561881 1810 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 ENSAP3-201ENST00000312710 333 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 RNU6-543P-201ENST00000362576 108 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 RN7SKP126-201ENST00000411143 300 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 RPS7P9-201ENST00000414704 586 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 TAF13P2-201ENST00000416876 286 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 RPL22P18-201ENST00000417197 377 ntBASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.81□□□□□ -1.48
CDK5RAP3Q96JB5 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms