Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC112204.1-201ENST00000502591 103 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC106800.3-201ENST00000511389 308 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AP003467.2-201ENST00000520175 319 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC008429.4-201ENST00000521201 182 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 FAM92A1P1-201ENST00000528023 890 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC125611.2-201ENST00000551907 647 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC087477.6-201ENST00000559595 843 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC005332.4-201ENST00000592752 579 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC104785.1-201ENST00000603220 588 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC012368.3-201ENST00000604190 219 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL359999.1-201ENST00000604513 294 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 MIR3662-201ENST00000637030 95 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 GUCY1B2-204ENST00000531898 1979 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC006378.2-201ENST00000623178 2476 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 HSPA8P17-201ENST00000427029 1382 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC010329.1-201ENST00000593903 8328 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 OR4A15-201ENST00000314706 1035 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 Y_RNA.72-201ENST00000362894 103 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 RNA5SP478-201ENST00000364657 115 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 RNA5SP77-201ENST00000365394 120 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 SNRPEP2-201ENST00000397592 279 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL049693.1-201ENST00000402760 611 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 FAT1P1-201ENST00000406588 507 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 RNA5SP118-201ENST00000410385 109 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 MTND4LP17-201ENST00000414607 293 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL158073.1-201ENST00000426848 1104 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 ATP5HP2-201ENST00000433885 485 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 NDUFA5P4-201ENST00000436704 385 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 PCNPP2-201ENST00000441651 455 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC099670.1-201ENST00000455141 783 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 GM2AP2-201ENST00000491764 562 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC106872.3-201ENST00000495104 446 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC012170.1-201ENST00000495139 359 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 MRPS5P3-201ENST00000515577 166 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 SNORA48.10-201ENST00000516965 160 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 HIGD1AP6-201ENST00000521833 279 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 IGHV1-14-201ENST00000523391 241 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AP005639.1-201ENST00000526939 192 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 RPL21P5-201ENST00000554662 472 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 ARGFXP2-201ENST00000579304 949 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC007603.3-201ENST00000636915 979 ntBASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
UBE3DQ7Z6J8 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms