Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC023421.1-201ENST00000590535 1785 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 RNA5SP319-201ENST00000362768 119 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 RNU6-178P-201ENST00000384631 104 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 RN7SKP125-201ENST00000410481 302 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 RN7SKP247-201ENST00000411094 308 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 SDHDP6-201ENST00000414693 480 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 GAPDHP49-201ENST00000421421 961 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 OSTCP5-201ENST00000425293 453 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 NOP56P2-201ENST00000447491 769 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AL031313.1-201ENST00000448435 256 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 EXOSC3P1-201ENST00000448649 500 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC079168.1-201ENST00000458741 345 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC006511.1-201ENST00000470614 315 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC073522.1-201ENST00000483312 377 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 PPIAP19-201ENST00000486414 492 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC091860.1-201ENST00000505723 432 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC106872.4-201ENST00000510050 523 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC093752.1-206ENST00000511823 336 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC018552.3-201ENST00000567416 561 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC015720.2-201ENST00000567709 334 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC005341.1-201ENST00000571086 708 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC011445.2-201ENST00000599274 173 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC233280.2-201ENST00000603917 1070 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC104695.2-201ENST00000605056 775 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC126175.1-201ENST00000617041 758 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC018926.3-201ENST00000618841 406 ntBASIC5.4□□□□□ -1.54
CCDC38Q502W7 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.4□□□□□ -1.54
CCDC38Q502W7 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC38Q502W7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC38Q502W7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.4□□□□□ -1.55
CCDC38Q502W7 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
CCDC38Q502W7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC38Q502W7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.4□□□□□ -1.55
CCDC38Q502W7 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.4□□□□□ -1.55
CCDC38Q502W7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CCDC38Q502W7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 MIR133B-201ENST00000362210 119 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 RN7SKP124-201ENST00000364730 341 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 SNORA51.12-201ENST00000384448 134 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC005522.1-201ENST00000395416 346 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 RNU2-65P-201ENST00000410162 185 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 RN7SKP199-201ENST00000410325 305 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 RPS7P9-201ENST00000414704 586 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 MTND4P3-201ENST00000417829 541 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AL358176.3-201ENST00000420757 454 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 UBE2V1P5-201ENST00000440070 405 ntBASIC5.39□□□□□ -1.55
CCDC38Q502W7 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC38Q502W7 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC38Q502W7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms