Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC003989.1-201ENST00000434569 565 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 CALM1P1-201ENST00000442082 433 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 C1DP4-201ENST00000455429 424 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC099563.1-201ENST00000456086 418 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC017015.1-201ENST00000477387 286 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC007182.2-201ENST00000489251 402 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 RPL35P6-201ENST00000490024 372 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 RN7SL350P-201ENST00000492591 299 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC106872.3-201ENST00000495104 446 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 RNU6-1281P-201ENST00000516223 105 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AL121594.2-201ENST00000541658 472 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC008126.1-201ENST00000549019 480 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC022884.3-201ENST00000579571 248 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR544B-201ENST00000582372 78 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR4795-201ENST00000584182 89 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 AC087283.1-201ENST00000604029 1074 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AP001836.1-201ENST00000604675 523 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 MIR1302-2-201ENST00000607096 138 ntBASIC6.31□□□□□ -1.4
PCDH1Q08174 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PCDH1Q08174 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.31□□□□□ -1.4
PCDH1Q08174 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
PCDH1Q08174 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.31□□□□□ -1.4
PCDH1Q08174 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDH1Q08174 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC105235.1-201ENST00000623208 1816 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 SNRPEP3-201ENST00000338402 276 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 RNU6-272P-201ENST00000411028 104 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 SPA17P1-201ENST00000416656 452 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 RBMY2KP-201ENST00000418221 992 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 BTF3L4P3-201ENST00000418879 476 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AL139184.1-202ENST00000422303 222 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 ISCA1P6-201ENST00000427740 390 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 PSMD10P2-201ENST00000432890 672 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 LSM1P1-201ENST00000438629 273 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 SNRPGP6-201ENST00000451124 220 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AL161747.1-201ENST00000480068 358 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 HMGN1P13-201ENST00000505795 138 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC111000.3-201ENST00000508057 576 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC006499.2-201ENST00000513470 337 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AP003034.1-201ENST00000534621 422 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AC005519.1-201ENST00000554490 601 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 RN7SL208P-201ENST00000577964 296 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 RPL29P33-201ENST00000587474 316 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC012507.3-201ENST00000603556 477 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 AC005514.1-201ENST00000623521 208 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AL683826.1-201ENST00000624104 627 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 AC091905.1-201ENST00000624400 311 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms