Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005962.2-201ENST00000611427 652 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC083843.3-201ENST00000623679 2186 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK1P53667 Z73965.1-201ENST00000623412 2297 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 AL022311.1-201ENST00000623726 19416 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 AL034370.1-201ENST00000397254 1590 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIMK1P53667 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIMK1P53667 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 FAM3C2-201ENST00000312214 681 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AC007618.1-201ENST00000366455 732 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 RN7SKP97-201ENST00000410966 333 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
LIMK1P53667 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK1P53667 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC004074.1-201ENST00000421810 1063 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AC009965.2-201ENST00000425328 970 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC073508.1-201ENST00000428866 656 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC074367.1-201ENST00000438685 1125 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 CDC27P1-201ENST00000445384 715 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK1P53667 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 TPT1P1-201ENST00000458495 518 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 PSAT1P4-201ENST00000466500 526 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.98□□□□□ -1.61
LIMK1P53667 VTA1P2-201ENST00000520205 911 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 PRPF19P1-201ENST00000584766 898 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 AC009027.1-201ENST00000604510 479 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 KATNBL1P5-201ENST00000605015 517 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 AL391834.1-201ENST00000609609 560 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 MIR6716-201ENST00000613413 80 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 uc_338.9-201ENST00000617424 182 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.98□□□□□ -1.61
LIMK1P53667 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK1P53667 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
LIMK1P53667 AC096656.1-201ENST00000623826 1364 ntBASIC4.98□□□□□ -1.61
LIMK1P53667 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK1P53667 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.98□□□□□ -1.61
LIMK1P53667 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
LIMK1P53667 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 AC000374.1-201ENST00000434698 1745 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
LIMK1P53667 AC009951.1-201ENST00000623674 2614 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 RNU6-650P-201ENST00000365658 111 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LIMK1P53667 RN7SKP263-201ENST00000411194 309 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 RPL12P9-201ENST00000412942 488 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 CYP4F29P-201ENST00000420685 446 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.97□□□□□ -1.61
LIMK1P53667 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.97□□□□□ -1.61
LIMK1P53667 AL162388.1-201ENST00000450912 352 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC005229.2-201ENST00000456995 399 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 SYT14P1-201ENST00000481459 721 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 PPM1AP1-201ENST00000502740 1135 ntBASIC4.97□□□□□ -1.61
LIMK1P53667 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.97□□□□□ -1.61
LIMK1P53667 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms