Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.95□□□□□ -1.62
SSR1P43307 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.95□□□□□ -1.62
SSR1P43307 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.95□□□□□ -1.62
SSR1P43307 OR1H1P-201ENST00000448731 937 ntBASIC4.95□□□□□ -1.62
SSR1P43307 OR52J1P-201ENST00000450596 932 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.95□□□□□ -1.62
SSR1P43307 RN7SL205P-201ENST00000490174 284 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC104971.1-201ENST00000495117 578 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC068305.1-201ENST00000497406 726 ntBASIC4.95□□□□□ -1.62
SSR1P43307 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 GAPDHP56-201ENST00000506031 988 ntBASIC4.95□□□□□ -1.62
SSR1P43307 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.95□□□□□ -1.62
SSR1P43307 AC110775.1-201ENST00000513721 462 ntBASIC4.95□□□□□ -1.62
SSR1P43307 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.95□□□□□ -1.62
SSR1P43307 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.95□□□□□ -1.62
SSR1P43307 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.95□□□□□ -1.62
SSR1P43307 AC079075.1-201ENST00000559543 878 ntBASIC4.95□□□□□ -1.62
SSR1P43307 RN7SL802P-201ENST00000577858 299 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC010615.3-201ENST00000597319 394 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.95□□□□□ -1.62
SSR1P43307 AC011453.2-201ENST00000603737 729 ntBASIC4.95□□□□□ -1.62
SSR1P43307 AC020634.1-201ENST00000608701 549 ntBASIC4.95□□□□□ -1.62
SSR1P43307 CR381572.2-201ENST00000624852 397 ntBASIC4.95□□□□□ -1.62
SSR1P43307 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
SSR1P43307 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSR1P43307 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.95□□□□□ -1.62
SSR1P43307 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.95□□□□□ -1.62
SSR1P43307 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 AL442639.1-201ENST00000625030 1899 ntBASIC4.94□□□□□ -1.62
SSR1P43307 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.94□□□□□ -1.62
SSR1P43307 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 RN7SKP115-201ENST00000363177 317 ntBASIC4.94□□□□□ -1.62
SSR1P43307 RNA5SP372-201ENST00000390836 115 ntBASIC4.94□□□□□ -1.62
SSR1P43307 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.94□□□□□ -1.62
SSR1P43307 AL451050.1-201ENST00000450126 415 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.94□□□□□ -1.62
SSR1P43307 AC079168.2-201ENST00000453977 416 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AURKAPS2-201ENST00000454983 333 ntBASIC4.94□□□□□ -1.62
SSR1P43307 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.94□□□□□ -1.62
SSR1P43307 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.94□□□□□ -1.62
SSR1P43307 SCARNA21.2-201ENST00000516600 166 ntBASIC4.94□□□□□ -1.62
SSR1P43307 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.94□□□□□ -1.62
SSR1P43307 AC109635.6-201ENST00000525487 1113 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AC021006.3-201ENST00000530771 192 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AC008033.2-201ENST00000542626 177 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AC068714.1-201ENST00000559623 800 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.94□□□□□ -1.62
SSR1P43307 RN7SL753P-201ENST00000581238 290 ntBASIC4.94□□□□□ -1.62
SSR1P43307 FAM106CP-201ENST00000582212 507 ntBASIC4.94□□□□□ -1.62
SSR1P43307 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.94□□□□□ -1.62
SSR1P43307 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.94□□□□□ -1.62
SSR1P43307 AC130352.1-201ENST00000602979 661 ntBASIC4.94□□□□□ -1.62
SSR1P43307 AL139395.1-201ENST00000603662 160 ntBASIC4.94□□□□□ -1.62
SSR1P43307 IMMP1LP1-201ENST00000605170 488 ntBASIC4.94□□□□□ -1.62
SSR1P43307 NF1P10-201ENST00000613227 742 ntBASIC4.94□□□□□ -1.62
SSR1P43307 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSR1P43307 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 CR788268.1-201ENST00000603931 1809 ntBASIC4.94□□□□□ -1.62
SSR1P43307 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.94□□□□□ -1.62
SSR1P43307 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSR1P43307 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSR1P43307 AC090229.1-201ENST00000590983 1609 ntBASIC4.94□□□□□ -1.62
SSR1P43307 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSR1P43307 AC017007.4-201ENST00000503353 1352 ntBASIC4.93□□□□□ -1.62
SSR1P43307 EXOC5P1-201ENST00000510543 1969 ntBASIC4.93□□□□□ -1.62
SSR1P43307 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SSR1P43307 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSR1P43307 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSR1P43307 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSR1P43307 RNA5SP191-201ENST00000362585 102 ntBASIC4.93□□□□□ -1.62
SSR1P43307 AL591848.1-201ENST00000413092 322 ntBASIC4.93□□□□□ -1.62
SSR1P43307 BX510359.3-201ENST00000422168 306 ntBASIC4.93□□□□□ -1.62
SSR1P43307 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 AL356390.1-201ENST00000455684 397 ntBASIC4.93□□□□□ -1.62
SSR1P43307 RPS4XP14-201ENST00000493072 781 ntBASIC4.93□□□□□ -1.62
SSR1P43307 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.93□□□□□ -1.62
SSR1P43307 RNU4-18P-201ENST00000516751 149 ntBASIC4.93□□□□□ -1.62
SSR1P43307 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.93□□□□□ -1.62
SSR1P43307 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.93□□□□□ -1.62
SSR1P43307 AC092851.1-201ENST00000535964 478 ntBASIC4.93□□□□□ -1.62
SSR1P43307 AC091515.1-201ENST00000548110 679 ntBASIC4.93□□□□□ -1.62
SSR1P43307 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.93□□□□□ -1.62
SSR1P43307 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.93□□□□□ -1.62
SSR1P43307 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.93□□□□□ -1.62
SSR1P43307 AC016769.4-201ENST00000616893 535 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms