Protein–RNA interactions for Protein: P23467

PTPRB, Receptor-type tyrosine-protein phosphatase beta, humanhuman

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRBP23467 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRBP23467 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 MTND5P12-201ENST00000502851 1449 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPRBP23467 AL590704.1-201ENST00000402856 794 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC068533.1-201ENST00000418542 415 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 RPL21P91-201ENST00000429231 479 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 CYCSP43-201ENST00000438233 310 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRBP23467 AL591623.2-201ENST00000449978 222 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRBP23467 AL591473.1-201ENST00000464297 313 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 RN7SL812P-201ENST00000493791 279 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC108145.1-201ENST00000503770 153 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
PTPRBP23467 DUXAP2-201ENST00000519198 589 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRBP23467 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC138832.1-201ENST00000522871 556 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
PTPRBP23467 MIR3944-201ENST00000581277 108 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC011471.1-201ENST00000585766 187 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 FAM27D1-201ENST00000612308 341 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC015804.1-201ENST00000622935 435 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPRBP23467 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC022417.1-201ENST00000624768 1303 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 EIF4A1P1-201ENST00000420241 934 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC091390.3-201ENST00000426478 338 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC104651.2-201ENST00000447549 528 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 ABCF2P2-201ENST00000450549 296 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRBP23467 RPL7P49-201ENST00000471402 708 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.11□□□□□ -1.75
PTPRBP23467 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.11□□□□□ -1.75
PTPRBP23467 AC112230.1-201ENST00000604342 547 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC241377.1-201ENST00000619797 406 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC018816.2-201ENST00000621460 353 ntBASIC4.11□□□□□ -1.75
PTPRBP23467 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PTPRBP23467 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PTPRBP23467 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTPRBP23467 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPRBP23467 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 AC019072.1-201ENST00000604535 1551 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 MAPK10-372ENST00000641954 3413 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PTPRBP23467 OR8F1P-201ENST00000425243 930 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 RPEP2-201ENST00000432149 701 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 HMGN2P31-201ENST00000432430 273 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 AL035246.1-201ENST00000433554 1255 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRBP23467 TPT1P1-201ENST00000458495 518 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 AF213884.1-201ENST00000488102 463 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.1□□□□□ -1.75
PTPRBP23467 RN7SKP141-201ENST00000516167 338 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 AC007179.3-201ENST00000604976 235 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 AC007546.1-201ENST00000619452 559 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 AC022106.2-201ENST00000620114 757 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.1□□□□□ -1.75
PTPRBP23467 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPRBP23467 BCORP1-203ENST00000513194 5093 ntBASIC4.1□□□□□ -1.75
PTPRBP23467 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.1□□□□□ -1.75
PTPRBP23467 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PTPRBP23467 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.09□□□□□ -1.75
PTPRBP23467 OR11H4-201ENST00000315409 1082 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 SNORA5A-201ENST00000384111 134 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 MIR7-3-201ENST00000384898 110 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 ENSAP1-201ENST00000392855 326 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 RN7SKP182-201ENST00000410772 298 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 ATP5G1P3-201ENST00000463301 410 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 AC006499.5-201ENST00000505037 514 ntBASIC4.09□□□□□ -1.75
PTPRBP23467 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms