Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 AC099654.2-201ENST00000433031 1980 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC103591.2-201ENST00000265259 766 ntBASIC4.79□□□□□ -1.64
CDH3P22223 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH3P22223 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH3P22223 MIR585-201ENST00000384887 94 ntBASIC4.79□□□□□ -1.64
CDH3P22223 RPL26P37-201ENST00000411983 438 ntBASIC4.79□□□□□ -1.64
CDH3P22223 RBMY2KP-201ENST00000418221 992 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AL121882.1-201ENST00000422893 417 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 RPL35AP21-201ENST00000437667 333 ntBASIC4.79□□□□□ -1.64
CDH3P22223 ELOCP10-201ENST00000440624 327 ntBASIC4.79□□□□□ -1.64
CDH3P22223 TXNP5-201ENST00000441043 315 ntBASIC4.79□□□□□ -1.64
CDH3P22223 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 AC006326.1-201ENST00000445465 787 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH3P22223 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 AC069277.2-201ENST00000454211 432 ntBASIC4.79□□□□□ -1.64
CDH3P22223 HMGB1P4-201ENST00000455362 567 ntBASIC4.79□□□□□ -1.64
CDH3P22223 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 AC092691.2-201ENST00000461787 803 ntBASIC4.79□□□□□ -1.64
CDH3P22223 RPL5P13-201ENST00000462840 709 ntBASIC4.79□□□□□ -1.64
CDH3P22223 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 AC113430.1-201ENST00000506872 718 ntBASIC4.79□□□□□ -1.64
CDH3P22223 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.79□□□□□ -1.64
CDH3P22223 VTA1P2-201ENST00000520205 911 ntBASIC4.79□□□□□ -1.64
CDH3P22223 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH3P22223 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH3P22223 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 TVP23CP2-201ENST00000571473 623 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AL031320.1-201ENST00000604177 357 ntBASIC4.79□□□□□ -1.64
CDH3P22223 ELOCP34-201ENST00000604436 327 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AP001521.2-201ENST00000608772 546 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC097460.3-201ENST00000623099 442 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC106858.1-201ENST00000637497 429 ntBASIC4.79□□□□□ -1.64
CDH3P22223 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 AC007382.1-201ENST00000624376 2618 ntBASIC4.79□□□□□ -1.64
CDH3P22223 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 OR14L1P-202ENST00000641545 3009 ntBASIC4.79□□□□□ -1.64
CDH3P22223 AC074029.4-201ENST00000624796 1859 ntBASIC4.79□□□□□ -1.64
CDH3P22223 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH3P22223 SALL4P2-201ENST00000423288 2910 ntBASIC4.79□□□□□ -1.64
CDH3P22223 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH3P22223 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH3P22223 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH3P22223 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH3P22223 ECM1P2-201ENST00000503354 1577 ntBASIC4.78□□□□□ -1.64
CDH3P22223 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH3P22223 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH3P22223 RNU6-984P-201ENST00000363236 109 ntBASIC4.78□□□□□ -1.64
CDH3P22223 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CDH3P22223 RNU6-1176P-201ENST00000390955 107 ntBASIC4.78□□□□□ -1.64
CDH3P22223 ATP5HP3-201ENST00000396994 486 ntBASIC4.78□□□□□ -1.64
CDH3P22223 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 RNU6-603P-201ENST00000411403 107 ntBASIC4.78□□□□□ -1.64
CDH3P22223 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 RPL7P11-201ENST00000437586 658 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC092013.1-201ENST00000438795 332 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 AC078857.1-201ENST00000469870 667 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 AC021146.3-201ENST00000511911 260 ntBASIC4.78□□□□□ -1.64
CDH3P22223 HMGN1P15-201ENST00000513870 295 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC105031.1-201ENST00000518550 476 ntBASIC4.78□□□□□ -1.64
CDH3P22223 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 NPM1P35-201ENST00000533043 868 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH3P22223 AC093014.1-201ENST00000548926 724 ntBASIC4.78□□□□□ -1.64
CDH3P22223 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.78□□□□□ -1.64
CDH3P22223 AC009117.1-201ENST00000563948 554 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 AC018695.5-201ENST00000605872 315 ntBASIC4.78□□□□□ -1.64
CDH3P22223 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH3P22223 uc_338.18-201ENST00000615451 175 ntBASIC4.78□□□□□ -1.64
CDH3P22223 AL391262.2-201ENST00000622466 494 ntBASIC4.78□□□□□ -1.64
CDH3P22223 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDH3P22223 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms