Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RPL36AP21-202ENST00000639134 430 ntBASIC5.71□□□□□ -1.5
ATF4P18848 AL731532.1-201ENST00000623972 4236 ntBASIC5.71□□□□□ -1.5
ATF4P18848 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATF4P18848 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATF4P18848 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATF4P18848 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATF4P18848 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATF4P18848 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ATF4P18848 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
ATF4P18848 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.71□□□□□ -1.5
ATF4P18848 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 AC008758.3-201ENST00000507003 1829 ntBASIC5.7□□□□□ -1.5
ATF4P18848 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATF4P18848 MAPK10-338ENST00000641647 3362 ntBASIC5.7□□□□□ -1.5
ATF4P18848 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 AC011155.1-201ENST00000316512 456 ntBASIC5.7□□□□□ -1.5
ATF4P18848 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATF4P18848 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 MIR133A2-201ENST00000347538 102 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RN7SKP237-201ENST00000364663 301 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RNU4-12P-201ENST00000365233 139 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 RNU6-730P-201ENST00000383954 104 ntBASIC5.7□□□□□ -1.5
ATF4P18848 Y_RNA.554-201ENST00000384672 102 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 EEF1GP7-201ENST00000422983 703 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 AC127526.2-201ENST00000426436 775 ntBASIC5.7□□□□□ -1.5
ATF4P18848 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 IGLV3-4-201ENST00000432300 244 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RPL12P17-201ENST00000432393 498 ntBASIC5.7□□□□□ -1.5
ATF4P18848 FCF1P1-201ENST00000432690 571 ntBASIC5.7□□□□□ -1.5
ATF4P18848 Z83313.1-201ENST00000433780 718 ntBASIC5.7□□□□□ -1.5
ATF4P18848 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 CR391992.1-201ENST00000438601 394 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 GAPDHP14-201ENST00000450472 937 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RPS29P5-201ENST00000452777 171 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC026336.1-201ENST00000466577 351 ntBASIC5.7□□□□□ -1.5
ATF4P18848 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ATF4P18848 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 AC066616.1-201ENST00000486795 413 ntBASIC5.7□□□□□ -1.5
ATF4P18848 MYL12BP2-201ENST00000503948 512 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC233724.10-201ENST00000510454 409 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC095059.2-201ENST00000510601 933 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RN7SKP277-201ENST00000516895 283 ntBASIC5.7□□□□□ -1.5
ATF4P18848 IGLV10-67-201ENST00000519446 325 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 AP003122.4-201ENST00000530980 758 ntBASIC5.7□□□□□ -1.5
ATF4P18848 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.7□□□□□ -1.5
ATF4P18848 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 SNORA59B-202ENST00000578183 701 ntBASIC5.7□□□□□ -1.5
ATF4P18848 RN7SL237P-201ENST00000580912 287 ntBASIC5.7□□□□□ -1.5
ATF4P18848 STARD6-204ENST00000584040 660 ntTSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.7□□□□□ -1.5
ATF4P18848 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 AC022239.4-201ENST00000602626 504 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC129492.5-201ENST00000603489 315 ntBASIC5.7□□□□□ -1.5
ATF4P18848 IMMP1LP1-201ENST00000605170 488 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AC113194.1-201ENST00000606037 500 ntBASIC5.7□□□□□ -1.5
ATF4P18848 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 AC097381.3-201ENST00000608962 462 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AL161734.1-201ENST00000609720 557 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AL445647.2-201ENST00000615170 130 ntBASIC5.7□□□□□ -1.5
ATF4P18848 AL596245.1-201ENST00000618994 362 ntBASIC5.7□□□□□ -1.5
ATF4P18848 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 MIR4496-201ENST00000635896 61 ntBASIC5.7□□□□□ -1.5
ATF4P18848 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.7□□□□□ -1.5
ATF4P18848 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
ATF4P18848 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 AF287957.1-201ENST00000607368 1595 ntBASIC5.7□□□□□ -1.5
ATF4P18848 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.7□□□□□ -1.5
ATF4P18848 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 AC109446.4-201ENST00000623235 2755 ntBASIC5.7□□□□□ -1.5
ATF4P18848 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.7□□□□□ -1.5
ATF4P18848 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ATF4P18848 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATF4P18848 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms