Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.26□□□□□ -1.57
TOP1P11387 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.26□□□□□ -1.57
TOP1P11387 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 AC090948.1-201ENST00000607464 549 ntBASIC5.26□□□□□ -1.57
TOP1P11387 AC020634.1-201ENST00000608701 549 ntBASIC5.26□□□□□ -1.57
TOP1P11387 AC239803.2-201ENST00000610161 430 ntBASIC5.26□□□□□ -1.57
TOP1P11387 AC006065.6-201ENST00000625201 545 ntBASIC5.26□□□□□ -1.57
TOP1P11387 AL596275.2-204ENST00000641628 552 ntBASIC5.26□□□□□ -1.57
TOP1P11387 AL596275.2-206ENST00000641957 626 ntBASIC5.26□□□□□ -1.57
TOP1P11387 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.26□□□□□ -1.57
TOP1P11387 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.26□□□□□ -1.57
TOP1P11387 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.26□□□□□ -1.57
TOP1P11387 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TOP1P11387 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.26□□□□□ -1.57
TOP1P11387 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 AC006971.1-201ENST00000407916 4486 ntBASIC5.25□□□□□ -1.57
TOP1P11387 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
TOP1P11387 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP1P11387 RNU1-20P-201ENST00000363314 162 ntBASIC5.25□□□□□ -1.57
TOP1P11387 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
TOP1P11387 RNU6-178P-201ENST00000384631 104 ntBASIC5.25□□□□□ -1.57
TOP1P11387 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TOP1P11387 MIR921-201ENST00000401133 56 ntBASIC5.25□□□□□ -1.57
TOP1P11387 FCF1P5-201ENST00000406490 482 ntBASIC5.25□□□□□ -1.57
TOP1P11387 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP1P11387 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.25□□□□□ -1.57
TOP1P11387 TMX2P1-201ENST00000436507 708 ntBASIC5.25□□□□□ -1.57
TOP1P11387 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.25□□□□□ -1.57
TOP1P11387 AC053481.1-201ENST00000467217 306 ntBASIC5.25□□□□□ -1.57
TOP1P11387 AP001960.1-201ENST00000506494 658 ntBASIC5.25□□□□□ -1.57
TOP1P11387 HPRT1P1-201ENST00000509498 657 ntBASIC5.25□□□□□ -1.57
TOP1P11387 IGLVIV-65-201ENST00000517313 360 ntBASIC5.25□□□□□ -1.57
TOP1P11387 CYCSP28-201ENST00000534284 321 ntBASIC5.25□□□□□ -1.57
TOP1P11387 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 AC091178.1-203ENST00000584586 279 ntBASIC5.25□□□□□ -1.57
TOP1P11387 AC026979.4-201ENST00000606555 645 ntBASIC5.25□□□□□ -1.57
TOP1P11387 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP1P11387 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
TOP1P11387 MIR6810-201ENST00000622701 70 ntBASIC5.25□□□□□ -1.57
TOP1P11387 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.25□□□□□ -1.57
TOP1P11387 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TOP1P11387 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
TOP1P11387 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.25□□□□□ -1.57
TOP1P11387 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TOP1P11387 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TOP1P11387 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TOP1P11387 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.24□□□□□ -1.57
TOP1P11387 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.24□□□□□ -1.57
TOP1P11387 AP001002.1-201ENST00000625148 1513 ntBASIC5.24□□□□□ -1.57
TOP1P11387 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TOP1P11387 RNU6-697P-201ENST00000363348 107 ntBASIC5.24□□□□□ -1.57
TOP1P11387 RNU1-130P-201ENST00000363930 160 ntBASIC5.24□□□□□ -1.57
TOP1P11387 RNA5SP372-201ENST00000390836 115 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AL136131.1-201ENST00000406079 803 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.24□□□□□ -1.57
TOP1P11387 AL358176.3-201ENST00000420757 454 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AC004448.2-201ENST00000422360 586 ntBASIC5.24□□□□□ -1.57
TOP1P11387 NPM1P26-201ENST00000426339 738 ntBASIC5.24□□□□□ -1.57
TOP1P11387 RPL23AP24-201ENST00000458203 385 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AC011276.1-201ENST00000469688 323 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AC037198.2-201ENST00000478845 733 ntBASIC5.24□□□□□ -1.57
TOP1P11387 NIP7P2-201ENST00000485801 544 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.24□□□□□ -1.57
TOP1P11387 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.24□□□□□ -1.57
TOP1P11387 HMGB2P1-201ENST00000591146 634 ntBASIC5.24□□□□□ -1.57
TOP1P11387 AL353600.1-201ENST00000608148 251 ntBASIC5.24□□□□□ -1.57
TOP1P11387 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.24□□□□□ -1.57
TOP1P11387 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.24□□□□□ -1.57
TOP1P11387 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP1P11387 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP1P11387 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TOP1P11387 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.24□□□□□ -1.57
TOP1P11387 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
TOP1P11387 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.23□□□□□ -1.57
TOP1P11387 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.23□□□□□ -1.57
TOP1P11387 HSPD1P14-201ENST00000432666 1618 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AC139769.1-204ENST00000472297 1931 ntBASIC5.23□□□□□ -1.57
TOP1P11387 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.23□□□□□ -1.57
TOP1P11387 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
TOP1P11387 HDGFP1-201ENST00000405943 252 ntBASIC5.23□□□□□ -1.57
TOP1P11387 VDAC1P9-201ENST00000412766 841 ntBASIC5.23□□□□□ -1.57
TOP1P11387 NIPA2P1-201ENST00000426223 976 ntBASIC5.23□□□□□ -1.57
TOP1P11387 RPL21P91-201ENST00000429231 479 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP1P11387 AC099063.2-201ENST00000446360 662 ntBASIC5.23□□□□□ -1.57
TOP1P11387 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
TOP1P11387 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.23□□□□□ -1.57
TOP1P11387 RN7SL860P-201ENST00000473738 223 ntBASIC5.23□□□□□ -1.57
TOP1P11387 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms