Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AL133270.1-201ENST00000402635 279 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RN7SKP106-201ENST00000410832 272 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ATG4AP1-201ENST00000416893 538 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ARAFP1-201ENST00000422172 605 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RPL36AP15-201ENST00000444514 266 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC108463.1-201ENST00000450258 347 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC104763.1-201ENST00000475274 360 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC022336.1-201ENST00000475510 337 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RPL12P20-201ENST00000475538 479 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC011005.3-201ENST00000491624 395 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC017037.1-201ENST00000508460 471 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 OR5M2P-201ENST00000529003 936 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC008147.3-201ENST00000548666 354 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 DUX4L52-201ENST00000549363 777 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 RPL27-207ENST00000590864 569 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC073091.2-201ENST00000603205 907 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 MIR432-201ENST00000606207 94 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC015922.4-201ENST00000612568 690 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AL391597.1-201ENST00000618707 694 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 TEX41-256ENST00000626411 368 ntTSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC068254.2-201ENST00000623938 3577 ntBASIC3.97□□□□□ -1.77
HLA-DPB1P04440 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HLA-DPB1P04440 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
HLA-DPB1P04440 MTCO1P15-201ENST00000529569 1526 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 RNA5SP388-201ENST00000362584 119 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 MIR298-201ENST00000401212 88 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 JKAMPP1-201ENST00000413804 919 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AL691447.1-201ENST00000419456 387 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 TPTE2P1-204ENST00000435256 593 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 TMX2P1-201ENST00000436507 708 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC104306.1-201ENST00000449702 371 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 RPL36AP41-201ENST00000493820 306 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC139783.2-201ENST00000504847 1145 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 HMGB3P13-201ENST00000511263 607 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 EIF1AXP2-201ENST00000555940 413 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC105129.1-201ENST00000560250 297 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 FAM106CP-201ENST00000582212 507 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 MIR4443-201ENST00000585052 53 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 Z98200.1-201ENST00000607298 470 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC108467.2-201ENST00000617640 1597 ntBASIC3.96□□□□□ -1.78
HLA-DPB1P04440 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HLA-DPB1P04440 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 ARHGAP42P1-201ENST00000507474 1976 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.95□□□□□ -1.78
HLA-DPB1P04440 LINC00622-201ENST00000562811 1570 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 AC103591.2-201ENST00000265259 766 ntBASIC3.95□□□□□ -1.78
HLA-DPB1P04440 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms