Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 AURKAPS1-201ENST00000451805 1212 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 SEPT7P3-201ENST00000455017 621 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 ANKRD26P4-201ENST00000455755 950 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC022215.1-201ENST00000481770 362 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 RPL32P33-201ENST00000487023 394 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC009120.1-201ENST00000493458 473 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 IGLV3-24-201ENST00000517477 197 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 C1GALT1P3-201ENST00000522049 819 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC090888.1-201ENST00000561335 1141 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC135628.1-201ENST00000568867 534 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC002400.1-201ENST00000569310 726 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS4BO75351 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC009237.13-201ENST00000603193 276 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 VIS1.1-201ENST00000610517 203 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AL592148.2-201ENST00000612210 372 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 AC021106.3-201ENST00000623925 531 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.39□□□□□ -1.55
VPS4BO75351 AC093311.1-201ENST00000506586 2021 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 AC104964.3-201ENST00000606115 2860 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
VPS4BO75351 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.39□□□□□ -1.55
VPS4BO75351 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 Z98755.1-201ENST00000407015 1384 ntBASIC5.39□□□□□ -1.55
VPS4BO75351 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
VPS4BO75351 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 AP000473.2-201ENST00000602659 1537 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 AC005005.4-201ENST00000623789 16698 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 NACA3P-201ENST00000359690 648 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 SNORA64.1-201ENST00000362600 132 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 RNA5SP507-201ENST00000363603 121 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 Y_RNA.318-201ENST00000365131 97 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 RNU6-98P-201ENST00000384173 107 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 MIR223-201ENST00000385204 110 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC104297.1-201ENST00000393779 870 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 USP9YP26-201ENST00000421008 661 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC127526.2-201ENST00000426436 775 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC005345.1-201ENST00000431868 217 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4BO75351 AC092393.1-201ENST00000439625 742 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 CDY12P-201ENST00000440679 1015 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC009263.1-201ENST00000441193 1239 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.38□□□□□ -1.55
VPS4BO75351 CDY13P-201ENST00000445813 1015 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC005002.1-201ENST00000447458 540 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 AL133477.1-201ENST00000457472 514 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 MTND2P28-201ENST00000457540 1044 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC011979.1-201ENST00000472300 483 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC091959.2-201ENST00000477363 321 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 RPL23AP37-201ENST00000479658 549 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AL049874.2-201ENST00000492636 288 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
VPS4BO75351 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.38□□□□□ -1.55
VPS4BO75351 AC104108.1-201ENST00000509930 412 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 MTND1P22-201ENST00000510572 951 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 NDUFB4P12-201ENST00000513465 390 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.38□□□□□ -1.55
VPS4BO75351 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.38□□□□□ -1.55
VPS4BO75351 AP002812.4-201ENST00000532139 286 ntBASIC5.38□□□□□ -1.55
VPS4BO75351 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms