Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
LDB2O43679 AL731532.2-201ENST00000623542 1953 ntBASIC4.95□□□□□ -1.62
LDB2O43679 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 AL031595.2-201ENST00000624215 19071 ntBASIC4.94□□□□□ -1.62
LDB2O43679 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 AL672167.2-201ENST00000377164 879 ntBASIC4.94□□□□□ -1.62
LDB2O43679 MIR585-201ENST00000384887 94 ntBASIC4.94□□□□□ -1.62
LDB2O43679 MIR137-201ENST00000385223 102 ntBASIC4.94□□□□□ -1.62
LDB2O43679 CHMP1B2P-201ENST00000399581 597 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AL133270.1-201ENST00000402635 279 ntBASIC4.94□□□□□ -1.62
LDB2O43679 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.94□□□□□ -1.62
LDB2O43679 GNG5P5-201ENST00000420444 220 ntBASIC4.94□□□□□ -1.62
LDB2O43679 OSTCP5-201ENST00000425293 453 ntBASIC4.94□□□□□ -1.62
LDB2O43679 RBMY2QP-201ENST00000429799 1147 ntBASIC4.94□□□□□ -1.62
LDB2O43679 USP9YP24-201ENST00000434374 697 ntBASIC4.94□□□□□ -1.62
LDB2O43679 VN1R54P-201ENST00000435210 1049 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.94□□□□□ -1.62
LDB2O43679 MTCYBP12-201ENST00000440559 1134 ntBASIC4.94□□□□□ -1.62
LDB2O43679 GTF3AP5-201ENST00000442645 697 ntBASIC4.94□□□□□ -1.62
LDB2O43679 USP9YP17-201ENST00000444617 696 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC000111.2-201ENST00000448200 210 ntBASIC4.94□□□□□ -1.62
LDB2O43679 Z95152.1-201ENST00000453556 656 ntBASIC4.94□□□□□ -1.62
LDB2O43679 RPL35AP28-201ENST00000459730 331 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC096992.1-201ENST00000459808 709 ntBASIC4.94□□□□□ -1.62
LDB2O43679 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 AC098583.1-201ENST00000480875 255 ntBASIC4.94□□□□□ -1.62
LDB2O43679 OR11I1P-201ENST00000486033 954 ntBASIC4.94□□□□□ -1.62
LDB2O43679 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.94□□□□□ -1.62
LDB2O43679 AC025459.1-201ENST00000504072 156 ntBASIC4.94□□□□□ -1.62
LDB2O43679 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.94□□□□□ -1.62
LDB2O43679 AC108120.2-201ENST00000512973 294 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC112673.1-201ENST00000513168 575 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC110775.1-201ENST00000513721 462 ntBASIC4.94□□□□□ -1.62
LDB2O43679 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 OR10V3P-201ENST00000525712 725 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AP000676.2-201ENST00000529711 301 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.94□□□□□ -1.62
LDB2O43679 TVP23CP2-201ENST00000571473 623 ntBASIC4.94□□□□□ -1.62
LDB2O43679 Z82195.1-201ENST00000604558 398 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC087783.2-201ENST00000605070 562 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AL136295.6-201ENST00000610486 658 ntBASIC4.94□□□□□ -1.62
LDB2O43679 EIF3FP1-201ENST00000613970 806 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 AC015914.2-201ENST00000618167 288 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AL035461.2-201ENST00000619201 524 ntBASIC4.94□□□□□ -1.62
LDB2O43679 AC004232.3-201ENST00000622977 525 ntBASIC4.94□□□□□ -1.62
LDB2O43679 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 AC009643.2-201ENST00000603543 1448 ntBASIC4.94□□□□□ -1.62
LDB2O43679 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
LDB2O43679 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 AC015813.6-201ENST00000624409 5808 ntBASIC4.94□□□□□ -1.62
LDB2O43679 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LDB2O43679 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LDB2O43679 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.93□□□□□ -1.62
LDB2O43679 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 MTCO1P15-201ENST00000529569 1526 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL132640.2-201ENST00000559968 1698 ntBASIC4.93□□□□□ -1.62
LDB2O43679 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LDB2O43679 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LDB2O43679 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LDB2O43679 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
LDB2O43679 GAPDHP15-201ENST00000398586 975 ntBASIC4.93□□□□□ -1.62
LDB2O43679 Z97832.1-201ENST00000402490 328 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL357515.1-201ENST00000402967 542 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 AL139128.1-201ENST00000413921 941 ntBASIC4.93□□□□□ -1.62
LDB2O43679 TMBIM7P-201ENST00000418074 855 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.93□□□□□ -1.62
LDB2O43679 AC005189.1-201ENST00000431286 310 ntBASIC4.93□□□□□ -1.62
LDB2O43679 MTCO2P20-201ENST00000437339 673 ntBASIC4.93□□□□□ -1.62
LDB2O43679 RPL7P11-201ENST00000437586 658 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.93□□□□□ -1.62
LDB2O43679 AC000041.1-201ENST00000439655 175 ntBASIC4.93□□□□□ -1.62
LDB2O43679 Z77249.1-201ENST00000444622 1175 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL591719.1-201ENST00000444669 744 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL096803.2-201ENST00000450032 677 ntBASIC4.93□□□□□ -1.62
LDB2O43679 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.93□□□□□ -1.62
LDB2O43679 RN7SL319P-201ENST00000480656 221 ntBASIC4.93□□□□□ -1.62
LDB2O43679 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms