Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 RNU1-130P-201ENST00000363930 160 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 RN7SKP224-201ENST00000364140 325 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 RPS20P14-201ENST00000412545 360 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1AO00322 SNRPFP1-201ENST00000414761 252 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 RPS23P10-201ENST00000416185 486 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1AO00322 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1AO00322 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.13□□□□□ -1.75
UPK1AO00322 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 AC053481.1-201ENST00000467217 306 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 RPS26P15-201ENST00000488067 348 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.13□□□□□ -1.75
UPK1AO00322 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.13□□□□□ -1.75
UPK1AO00322 AP001160.4-201ENST00000596971 382 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
UPK1AO00322 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 AC097504.1-201ENST00000515103 2415 ntBASIC4.13□□□□□ -1.75
UPK1AO00322 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.13□□□□□ -1.75
UPK1AO00322 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
UPK1AO00322 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1AO00322 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1AO00322 OR56B2P-202ENST00000641377 2453 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 RNA5SP505-201ENST00000364748 108 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 MIR3065-201ENST00000390137 79 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 RPS3AP23-201ENST00000401762 784 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 AC119751.6-201ENST00000416712 186 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC092570.3-201ENST00000420113 693 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1AO00322 RPL23AP1-201ENST00000428990 471 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.12□□□□□ -1.75
UPK1AO00322 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 AC114495.1-201ENST00000441274 436 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 RPL21P126-201ENST00000470049 478 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AGGF1P3-201ENST00000493675 1213 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 IGHV3-63-201ENST00000518422 341 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 AL137072.1-201ENST00000603444 466 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC012409.3-201ENST00000611343 981 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AL121873.1-201ENST00000616013 524 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 MIR4727-201ENST00000622232 55 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 AC019278.1-201ENST00000623516 479 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.12□□□□□ -1.75
UPK1AO00322 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 IQCB2P-201ENST00000401788 1633 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
UPK1AO00322 AL132640.2-201ENST00000559968 1698 ntBASIC4.12□□□□□ -1.75
UPK1AO00322 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
UPK1AO00322 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
UPK1AO00322 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
UPK1AO00322 AC012618.3-205ENST00000637896 1496 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.11□□□□□ -1.75
UPK1AO00322 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.11□□□□□ -1.75
UPK1AO00322 MIR129-1-201ENST00000384972 72 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 MIR137-201ENST00000385223 102 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 CYB5AP4-201ENST00000396692 399 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
UPK1AO00322 MIR1911-201ENST00000410783 80 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 RNA5SP306-201ENST00000411087 107 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 TMSB10P2-201ENST00000416049 131 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC010740.1-201ENST00000417035 684 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AL139095.3-201ENST00000419672 1203 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.11□□□□□ -1.75
UPK1AO00322 FTH1P16-201ENST00000435241 552 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 AC104306.1-201ENST00000449702 371 ntBASIC4.11□□□□□ -1.75
UPK1AO00322 DHFRP3-201ENST00000455595 559 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms