Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC092685.1-201ENST00000447960 1243 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 MTND2P8-201ENST00000450555 1025 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC091685.2-201ENST00000454924 864 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC097484.1-201ENST00000471148 389 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 SUMO2P5-201ENST00000506790 245 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC004980.4-201ENST00000513375 203 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC092593.2-201ENST00000513866 913 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC006427.1-201ENST00000514359 712 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 OR8G5-201ENST00000524943 1041 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 OR1F2P-201ENST00000570470 933 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR4436B2-201ENST00000581415 91 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 MIR4436B1-201ENST00000583272 91 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AL606834.3-201ENST00000602615 496 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC018695.5-201ENST00000605872 315 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC124016.2-201ENST00000610058 665 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC100827.5-201ENST00000615883 426 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC074140.1-201ENST00000621617 208 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 AC091905.4-201ENST00000623432 202 ntBASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NCKIPSDQ9NZQ3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 AC021242.1-201ENST00000507315 2035 ntBASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 AC100778.3-201ENST00000580060 1750 ntBASIC5.15□□□□□ -1.58
NCKIPSDQ9NZQ3 RPS27AP11-201ENST00000402798 447 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01347-201ENST00000417964 355 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 PSMD10P3-201ENST00000437000 448 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 H2AFZP6-201ENST00000444403 394 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC044797.1-201ENST00000445744 679 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 MTND1P33-201ENST00000446251 917 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC099063.2-201ENST00000446360 662 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 RNU7-27P-201ENST00000459281 62 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 RPS29P22-201ENST00000472363 168 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 RPS17P11-201ENST00000474297 293 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 RN7SL591P-201ENST00000496150 292 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC021146.5-201ENST00000503544 545 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC010476.1-201ENST00000519111 851 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 BRD9P1-201ENST00000529855 560 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AP002373.2-201ENST00000541631 1060 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC008083.2-201ENST00000546707 476 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 OR11J2P-201ENST00000555298 907 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR4509-3-201ENST00000578671 94 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR4509-2-201ENST00000583920 94 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 Z99289.3-201ENST00000605586 594 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 MIR4509-1-201ENST00000618224 94 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 BX005214.3-202ENST00000619809 325 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 CU459211.1-201ENST00000635667 749 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC132825.7-201ENST00000638744 335 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 ZNF652P1-201ENST00000442420 1309 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 AC083843.3-201ENST00000623679 2186 ntBASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
NCKIPSDQ9NZQ3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 AC092747.4-201ENST00000620519 1861 ntBASIC5.14□□□□□ -1.59
NCKIPSDQ9NZQ3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 181.4 ms