Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC008966.2-201ENST00000606157 453 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AL353600.1-201ENST00000608148 251 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC063923.1-201ENST00000478982 1619 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AL929601.4-201ENST00000613011 1341 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AL022722.2-201ENST00000402519 180 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RPL23AP26-201ENST00000412728 464 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 BTF3P10-201ENST00000433415 495 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 MTCYBP21-201ENST00000443300 1113 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 VN1R32P-201ENST00000452234 905 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC010547.7-201ENST00000570323 333 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 SNX18P1Y-201ENST00000616231 511 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP196-201ENST00000625967 102 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
KIAA1549Q9HCM3 LARP1BP1-201ENST00000506036 1359 ntBASIC3.9□□□□□ -1.78
KIAA1549Q9HCM3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
KIAA1549Q9HCM3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
KIAA1549Q9HCM3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.9□□□□□ -1.78
KIAA1549Q9HCM3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 AL161909.1-201ENST00000397390 712 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 VDAC1P9-201ENST00000412766 841 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 RPL7P33-201ENST00000444159 742 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 RPL10P17-201ENST00000453852 316 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 ARL4AP1-201ENST00000503220 705 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 AC113403.1-201ENST00000604910 193 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 EIF2AP4-201ENST00000424793 1781 ntBASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
KIAA1549Q9HCM3 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC083843.2-201ENST00000568248 6253 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 MFSD13B-201ENST00000420133 1290 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 COX6CP15-201ENST00000426313 211 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC092447.2-201ENST00000435487 669 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC006517.1-201ENST00000480485 328 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 NPM1P6-201ENST00000521088 871 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 SS18L2P2-201ENST00000583960 235 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AL031666.3-201ENST00000609320 1006 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AL122125.1-201ENST00000616999 600 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AL139254.3-201ENST00000641097 674 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 LINC01109-201ENST00000603837 3081 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC009951.1-201ENST00000623674 2614 ntBASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.89□□□□□ -1.79
KIAA1549Q9HCM3 DYNLL1P7-201ENST00000429273 258 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms