Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 BTG4P1-201ENST00000510421 183 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 HAUS1P3-201ENST00000523909 662 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC090666.1-201ENST00000578241 445 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 RN7SL339P-201ENST00000580597 296 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 MTCO2P22-201ENST00000603246 681 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC010424.2-201ENST00000607594 443 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC015804.1-201ENST00000622935 435 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC112694.2-201ENST00000623697 768 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC073342.3-201ENST00000624211 193 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 INTS6P1-201ENST00000504674 2530 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 SMG1P6-201ENST00000532337 2930 ntBASIC4.98□□□□□ -1.61
PCDH9Q9HC56 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
PCDH9Q9HC56 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RN7SKP104-201ENST00000362605 328 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RPL26P37-201ENST00000411983 438 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 BX664727.1-201ENST00000416024 466 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AL451139.1-201ENST00000434718 346 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 PSMD10P3-201ENST00000437000 448 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RPL7P11-201ENST00000437586 658 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 TDGF1P1-201ENST00000445734 527 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RPL7L1P1-201ENST00000448259 785 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RPL5P13-201ENST00000462840 709 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RN7SL329P-201ENST00000467740 299 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 LARP7P4-201ENST00000481075 878 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 OR5H3P-201ENST00000502817 919 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 RNA5SP392-201ENST00000516905 112 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 OR5AZ1P-201ENST00000527448 943 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AF230666.2-201ENST00000602328 725 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC005034.4-201ENST00000603612 899 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC079880.2-201ENST00000603790 1213 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AP001521.2-201ENST00000608772 546 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AL022401.1-201ENST00000619498 108 ntBASIC4.97□□□□□ -1.61
PCDH9Q9HC56 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PCDH9Q9HC56 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.96□□□□□ -1.61
PCDH9Q9HC56 AC099654.2-201ENST00000433031 1980 ntBASIC4.96□□□□□ -1.61
PCDH9Q9HC56 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
PCDH9Q9HC56 AL445487.1-201ENST00000415694 1580 ntBASIC4.96□□□□□ -1.62
PCDH9Q9HC56 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.96□□□□□ -1.62
PCDH9Q9HC56 ARL4AP5-201ENST00000404372 599 ntBASIC4.96□□□□□ -1.62
PCDH9Q9HC56 RN7SKP97-201ENST00000410966 333 ntBASIC4.96□□□□□ -1.62
PCDH9Q9HC56 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms