Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX3Q99909 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 RNU1-43P-201ENST00000365052 165 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 RNU6-609P-201ENST00000365459 107 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 OR4K12P-201ENST00000406538 961 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC234782.4-201ENST00000417646 1048 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 LINC01347-201ENST00000417964 355 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 RPL19P16-201ENST00000433839 588 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC245047.2-201ENST00000441060 530 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX3Q99909 RPL15P21-201ENST00000495592 567 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 PPM1AP1-201ENST00000502740 1135 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 FTH1P24-201ENST00000503502 462 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 MTATP6P22-201ENST00000507369 598 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 AC021106.1-201ENST00000509020 1058 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC147055.3-201ENST00000510547 851 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 HMGB2P1-201ENST00000591146 634 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 AC069307.1-201ENST00000602820 447 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC009237.13-201ENST00000603193 276 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC108738.1-201ENST00000603703 237 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC079610.2-201ENST00000604818 690 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC084824.5-201ENST00000612009 413 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.32□□□□□ -1.72
SSX3Q99909 BX005214.3-202ENST00000619809 325 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 MIR6719-201ENST00000622428 87 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AC067931.1-201ENST00000624190 671 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AP000843.1-201ENST00000624880 701 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 AP000720.1-201ENST00000625091 483 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
SSX3Q99909 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
SSX3Q99909 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 MTND5P11-201ENST00000511037 1812 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
SSX3Q99909 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SSX3Q99909 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
SSX3Q99909 AC092162.3-201ENST00000624511 1624 ntBASIC4.32□□□□□ -1.72
SSX3Q99909 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC109780.1-201ENST00000451768 1344 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX3Q99909 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 SNORA70-201ENST00000384436 135 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SSX3Q99909 HSPD1P16-201ENST00000402302 394 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 AL353093.1-201ENST00000441292 436 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AC092685.1-201ENST00000447960 1243 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SSX3Q99909 AC093763.2-201ENST00000505334 1223 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC022790.1-201ENST00000522872 204 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 OR4A2P-201ENST00000527276 913 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX3Q99909 YWHABP2-201ENST00000540201 713 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.31□□□□□ -1.72
SSX3Q99909 AL161713.1-201ENST00000555538 145 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.31□□□□□ -1.72
SSX3Q99909 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC044860.2-201ENST00000561005 179 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.31□□□□□ -1.72
SSX3Q99909 AC093510.2-201ENST00000562820 896 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.31□□□□□ -1.72
SSX3Q99909 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms