Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNA5SP183-201ENST00000362452 119 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 U3.3-201ENST00000362986 216 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 RNU4-68P-201ENST00000364314 141 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AP000534.2-201ENST00000412729 568 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01881-201ENST00000416103 412 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC048351.1-201ENST00000420064 602 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL592437.1-201ENST00000443781 492 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 Z77249.1-201ENST00000444622 1175 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL050341.1-201ENST00000447743 313 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 BX842559.2-201ENST00000451418 605 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 RPL7P48-201ENST00000461513 746 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 OR4U1P-201ENST00000554958 912 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC127381.1-201ENST00000555979 939 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC027104.1-201ENST00000563702 681 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC022884.2-201ENST00000578535 580 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 MIR548Y-201ENST00000582739 110 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 CCDC58P3-201ENST00000590792 430 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC096553.1-201ENST00000605169 829 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AL512329.2-201ENST00000607350 548 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AP002791.1-201ENST00000623291 381 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AP002505.2-201ENST00000623585 696 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC019226.2-201ENST00000625973 424 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 LINC01808-202ENST00000641680 1116 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 AC073055.1-201ENST00000456901 1621 ntBASIC5.84□□□□□ -1.47
CDK5RAP3Q96JB5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 AC009313.2-201ENST00000417893 1941 ntBASIC5.84□□□□□ -1.48
CDK5RAP3Q96JB5 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 STX3-208ENST00000641815 3236 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 RNU1-43P-201ENST00000365052 165 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 BMS1P3-201ENST00000372011 932 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 RPL21P67-201ENST00000402896 478 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MIR1286-201ENST00000408112 78 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 TCEA1P4-201ENST00000415066 844 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MTCO2P21-201ENST00000419780 677 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 FTH1P16-201ENST00000435241 552 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MTCYBP31-201ENST00000438855 1122 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AL450263.2-201ENST00000439400 589 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 MTCYBP11-201ENST00000447254 1109 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 HMGB1P4-201ENST00000455362 567 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 NAP1L1P3-201ENST00000462291 880 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 RPS21P4-201ENST00000487122 248 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC024558.1-201ENST00000505008 528 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AC119751.1-201ENST00000513357 765 ntBASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.83□□□□□ -1.48
CDK5RAP3Q96JB5 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms