Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AL672167.1-205ENST00000641112 3080 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RNU4-39P-201ENST00000362455 127 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RNU6-178P-201ENST00000384631 104 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 MT-RNR1-201ENST00000389680 954 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 TMSB10P2-201ENST00000416049 131 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC062016.2-201ENST00000420950 676 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RPL18P10-201ENST00000425606 538 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 NPM1P26-201ENST00000426339 738 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AL121578.1-201ENST00000428051 892 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 FTH1P16-201ENST00000435241 552 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC243772.1-201ENST00000451620 410 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC015795.1-201ENST00000513669 327 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RAB9BP1-201ENST00000519581 626 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC034205.1-201ENST00000520621 638 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RPL7P50-201ENST00000600588 727 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AP002360.3-201ENST00000607673 710 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC131238.1-201ENST00000617135 328 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 LINC00901.1-201ENST00000617252 152 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 AL023881.1-201ENST00000621088 301 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 DDX18P3-201ENST00000404856 2007 ntBASIC4.5□□□□□ -1.69
ECHDC3Q96DC8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 U3.22-201ENST00000391120 215 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL136131.1-201ENST00000406079 803 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC009302.1-201ENST00000417147 390 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC073136.2-201ENST00000417282 849 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL358176.3-201ENST00000420757 454 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC009480.2-201ENST00000422916 432 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RPL12P34-201ENST00000424532 479 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC012519.1-201ENST00000424588 610 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC023141.6-201ENST00000429418 337 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 BTG3P1-201ENST00000435859 716 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AP000936.3-201ENST00000438127 255 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 EIF2S2P2-201ENST00000447161 982 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 Z95152.1-201ENST00000453556 656 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 DHFRP3-201ENST00000455595 559 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC013356.1-201ENST00000489027 564 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RPS4XP18-201ENST00000495480 763 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 DYNLL1P4-201ENST00000549314 266 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 RPL26P30-202ENST00000602923 645 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC233280.2-201ENST00000603917 1070 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC008966.2-201ENST00000606157 453 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AC090948.1-201ENST00000607464 549 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 AL035461.2-201ENST00000619201 524 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.49□□□□□ -1.69
ECHDC3Q96DC8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms