Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SUGT1P3-202ENST00000604259 383 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC105129.3-201ENST00000605455 485 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC007204.2-201ENST00000615022 616 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC109583.2-201ENST00000617367 129 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AP003400.3-201ENST00000624904 346 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 PROS2P-201ENST00000474651 1951 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 DDX18P4-201ENST00000511690 1966 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 AC093849.1-201ENST00000563631 2209 ntBASIC5.03□□□□□ -1.6
CTHRC1Q96CG8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC004158.1-201ENST00000564508 4319 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AP005901.5-201ENST00000545779 1796 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 RN7SKP162-201ENST00000363605 345 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC093719.1-202ENST00000392735 373 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AL133388.1-201ENST00000404509 287 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC016907.1-201ENST00000419483 435 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 GTF2IP23-201ENST00000423746 351 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 RPL7AP49-201ENST00000429522 581 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC022022.1-201ENST00000430304 178 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AL591438.1-201ENST00000433508 581 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 GTF2IP7-202ENST00000436677 309 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 SPRYD7P1-201ENST00000443861 570 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 RN7SL547P-201ENST00000490793 290 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 EIF3LP3-201ENST00000495197 822 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 RPS24P16-201ENST00000497294 392 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 IGBP1P4-201ENST00000503202 879 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC091435.1-201ENST00000505442 584 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 XKRY-201ENST00000510392 1100 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 SCARNA21.2-201ENST00000516600 166 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC092747.2-201ENST00000545069 983 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 DUXAP1-201ENST00000556632 463 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC079171.1-201ENST00000568788 914 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 MIR4489-201ENST00000578869 62 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 DUXAP11-201ENST00000603858 526 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC080013.3-201ENST00000606839 578 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC079395.2-201ENST00000610982 737 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC121761.2-201ENST00000617300 689 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC010608.2-201ENST00000624830 470 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AL049737.1-201ENST00000413920 1403 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AC021755.1-201ENST00000559747 1447 ntBASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CTHRC1Q96CG8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 ELL2P3-201ENST00000457883 1602 ntBASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 ECM1P2-201ENST00000503354 1577 ntBASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CTHRC1Q96CG8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms