Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 AC095050.2-201ENST00000510748 1458 ntBASIC5.39□□□□□ -1.55
SIMC1Q8NDZ2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC073055.1-201ENST00000456901 1621 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC133552.1-201ENST00000569988 4007 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC144833.1-201ENST00000567953 4089 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL159987.1-201ENST00000347911 293 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 Y_RNA.77-201ENST00000362962 107 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RNU6-98P-201ENST00000384173 107 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC093719.1-202ENST00000392735 373 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL021407.1-201ENST00000404531 386 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC092745.2-202ENST00000411880 369 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MTND4LP11-201ENST00000422184 280 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MTND4P20-201ENST00000424125 869 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RPF2P1-201ENST00000424137 906 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC092393.1-201ENST00000439625 742 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MTND4P25-201ENST00000441039 533 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC023271.1-201ENST00000445936 1090 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL360221.1-201ENST00000445989 335 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC009961.3-201ENST00000449832 765 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MRPL35P4-201ENST00000453682 566 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL133477.1-201ENST00000457472 514 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RNU7-125P-201ENST00000458760 62 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RN7SL197P-201ENST00000466981 299 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 TRBV8-2-201ENST00000475637 270 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC069304.1-201ENST00000491593 704 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC009120.1-201ENST00000493458 473 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 DUTP1-201ENST00000493631 470 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC080014.1-201ENST00000496877 1201 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC105384.2-201ENST00000508433 640 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC138938.1-201ENST00000515431 782 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 HMGN2P36-201ENST00000529541 409 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AP000648.1-201ENST00000529682 397 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MTND4LP24-201ENST00000572277 291 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RBM22P1-201ENST00000578589 1214 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL513327.3-201ENST00000602618 469 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC123786.2-201ENST00000603459 275 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RBM11P1-201ENST00000604951 799 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL031601.1-201ENST00000605702 394 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL450489.1-201ENST00000612071 468 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC022467.1-201ENST00000614738 749 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 Z69908.1-201ENST00000622603 247 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC007490.1-201ENST00000624321 703 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC091965.5-201ENST00000624785 342 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL049767.1-202ENST00000637826 242 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AL049737.1-201ENST00000413920 1403 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC107027.3-201ENST00000565095 3473 ntBASIC5.38□□□□□ -1.55
SIMC1Q8NDZ2 AC005332.5-201ENST00000591222 2919 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RNF6P1-201ENST00000444889 1784 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 MTND5P29-201ENST00000458676 1807 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 PHKBP1-201ENST00000450951 1951 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 ENSAP3-201ENST00000312710 333 ntBASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.37□□□□□ -1.55
SIMC1Q8NDZ2 RNU6-83P-201ENST00000384568 112 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms