Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AF230666.2-201ENST00000602328 725 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC007423.1-201ENST00000605009 627 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC087783.2-201ENST00000605070 562 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC006213.5-201ENST00000619673 288 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 AC126323.6-202ENST00000568092 3511 ntBASIC5.11□□□□□ -1.59
PRPF39Q86UA1 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
PRPF39Q86UA1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RN7SKP95-201ENST00000362860 303 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RNA5SP428-201ENST00000365129 132 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 VTA1P1-201ENST00000414044 866 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 PNRC2P1-201ENST00000423940 420 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AL360081.1-201ENST00000428299 555 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RPS20P1-201ENST00000434853 354 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 TPTE2P6-202ENST00000445572 1007 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 TCEA1P1-201ENST00000449716 880 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 TPMTP4-201ENST00000450749 678 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 PHKBP1-201ENST00000450951 1951 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC006511.1-201ENST00000470614 315 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 MTND6P6-201ENST00000478031 263 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RPL5P22-201ENST00000480199 884 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RN7SL205P-201ENST00000490174 284 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 RFPL4AP5-201ENST00000514977 504 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC116553.2-201ENST00000564203 463 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC243654.2-201ENST00000612843 443 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC022106.2-201ENST00000620114 757 ntBASIC5.1□□□□□ -1.59
PRPF39Q86UA1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF39Q86UA1 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 MTND4P31-201ENST00000425607 1343 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 METTL21EP-201ENST00000298105 713 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC011155.1-201ENST00000316512 456 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 RNU6-146P-201ENST00000384602 108 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 LRRC37BP1-201ENST00000398851 714 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 MTND4P11-201ENST00000417020 1058 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 OR2AM1P-201ENST00000422137 422 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL158073.1-201ENST00000426848 1104 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 RPL7P29-201ENST00000437151 728 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL354714.3-201ENST00000447284 493 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC239809.1-201ENST00000450470 217 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AL691482.1-201ENST00000453255 87 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC078857.1-201ENST00000469870 667 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 RPS29P22-201ENST00000472363 168 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC007686.1-201ENST00000488511 463 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 RNA5SP43-201ENST00000516559 110 ntBASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF39Q86UA1 UBTFL9-201ENST00000534504 1148 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms