Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RNU4-73P-201ENST00000363164 141 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RNU6-878P-201ENST00000384578 110 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL590290.1-201ENST00000405336 380 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL133260.1-201ENST00000405720 405 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC073264.1-201ENST00000411508 416 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 CYP4F30P-202ENST00000420048 405 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 SNRPEP10-201ENST00000420249 274 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 PIGFP2-201ENST00000421400 651 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL513174.1-201ENST00000423182 629 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 NANOGP6-201ENST00000429190 847 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC009961.2-201ENST00000435771 251 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 VN1R38P-201ENST00000450265 887 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL590365.1-201ENST00000450788 243 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC117394.1-201ENST00000477323 567 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RPS3AP14-201ENST00000483907 780 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RPL35P6-201ENST00000490024 372 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC117522.3-201ENST00000507974 584 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC138517.1-201ENST00000515724 568 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RGS4-207ENST00000527809 817 ntTSL 4 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 OR8A2P-201ENST00000528631 952 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 OR5AN2P-201ENST00000534535 896 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC008055.1-201ENST00000547032 609 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL512360.1-201ENST00000555346 234 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC026898.1-201ENST00000586404 571 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL589863.1-201ENST00000595383 631 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC073091.2-201ENST00000603205 907 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC008115.3-201ENST00000614874 549 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC104010.1-201ENST00000616889 150 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 MIR6823-201ENST00000622118 61 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC145207.9-201ENST00000623802 325 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 AC231657.1-201ENST00000624313 397 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 OLMALINC-203ENST00000641087 3779 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 DDX18P4-201ENST00000511690 1966 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 MTCO1P14-201ENST00000441695 1559 ntBASIC6.06□□□□□ -1.44
UBE3DQ7Z6J8 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 GDI2P1-201ENST00000429312 1336 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LCOR-201ENST00000286067 4542 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 Y_RNA.1-201ENST00000352915 104 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 SNORA64.3-201ENST00000365647 134 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RNU6-533P-201ENST00000384144 107 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 Y_RNA.481-201ENST00000384373 102 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 MIR551B-201ENST00000384984 96 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 Y_RNA.608-201ENST00000410647 95 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RNA5SP115-201ENST00000411160 107 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC092634.6-201ENST00000418558 192 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 FAM183DP-201ENST00000421987 399 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC002504.1-201ENST00000438281 691 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 CACYBPP1-201ENST00000438592 684 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 BMS1P10-201ENST00000443754 1120 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC007677.1-201ENST00000445757 515 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 SNRPGP6-201ENST00000451124 220 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AC073476.1-201ENST00000452854 407 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 AL133351.3-201ENST00000454998 193 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 OR9A1P-202ENST00000484361 945 ntBASIC6.05□□□□□ -1.44
UBE3DQ7Z6J8 RPS27P23-201ENST00000487608 251 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 159.3 ms