Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC243756.2-201ENST00000618406 463 ntBASIC7.52□□□□□ -1.21
SMARCA4P51532 OR5BE1P-202ENST00000641168 1176 ntBASIC7.52□□□□□ -1.21
SMARCA4P51532 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.52□□□□□ -1.21
SMARCA4P51532 AC006042.3-201ENST00000454684 1469 ntBASIC7.51□□□□□ -1.21
SMARCA4P51532 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.51□□□□□ -1.21
SMARCA4P51532 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC7.51□□□□□ -1.21
SMARCA4P51532 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 MIR483-201ENST00000385070 76 ntBASIC7.51□□□□□ -1.21
SMARCA4P51532 RN7SKP156-201ENST00000410308 342 ntBASIC7.51□□□□□ -1.21
SMARCA4P51532 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.51□□□□□ -1.21
SMARCA4P51532 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.51□□□□□ -1.21
SMARCA4P51532 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC7.51□□□□□ -1.21
SMARCA4P51532 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 ZNF285B-201ENST00000561698 1767 ntBASIC7.51□□□□□ -1.21
SMARCA4P51532 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SMARCA4P51532 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SMARCA4P51532 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SMARCA4P51532 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SMARCA4P51532 TET1P1-201ENST00000426627 2301 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
SMARCA4P51532 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
SMARCA4P51532 EIF1P3-201ENST00000423841 334 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC7.5□□□□□ -1.21
SMARCA4P51532 AC006011.1-201ENST00000442758 349 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 RPS11P1-201ENST00000451072 473 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 RPS20P21-201ENST00000466859 343 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 PAICSP4-201ENST00000517543 1253 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 HMGB2P1-201ENST00000591146 634 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 AL606490.9-201ENST00000603331 271 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 AC234782.5-201ENST00000617723 324 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.5□□□□□ -1.21
SMARCA4P51532 FP236240.3-201ENST00000623061 327 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC7.5□□□□□ -1.21
SMARCA4P51532 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
SMARCA4P51532 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.5□□□□□ -1.21
SMARCA4P51532 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.5□□□□□ -1.21
SMARCA4P51532 AL929601.4-201ENST00000613011 1341 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 AC005831.1-201ENST00000624384 1697 ntBASIC7.5□□□□□ -1.21
SMARCA4P51532 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC7.5□□□□□ -1.21
SMARCA4P51532 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SMARCA4P51532 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.49□□□□□ -1.21
SMARCA4P51532 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SMARCA4P51532 MIR7-3-201ENST00000384898 110 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 MIR1911-201ENST00000410783 80 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 AP000907.1-201ENST00000428428 510 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC7.49□□□□□ -1.21
SMARCA4P51532 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC7.49□□□□□ -1.21
SMARCA4P51532 RPS29P19-201ENST00000479709 171 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 GAPDHP36-201ENST00000480688 918 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 RPS4XP15-201ENST00000489210 795 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC7.49□□□□□ -1.21
SMARCA4P51532 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMARCA4P51532 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMARCA4P51532 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC7.49□□□□□ -1.21
SMARCA4P51532 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SMARCA4P51532 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMARCA4P51532 MIR1179-201ENST00000408703 91 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC7.49□□□□□ -1.21
SMARCA4P51532 AL353748.1-201ENST00000440753 474 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 SNORA59A-201ENST00000459326 152 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.49□□□□□ -1.21
SMARCA4P51532 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
SMARCA4P51532 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.49□□□□□ -1.21
SMARCA4P51532 AL160281.1-201ENST00000605307 311 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 COX6CP4-201ENST00000605798 228 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 AC091905.2-201ENST00000623143 306 ntBASIC7.49□□□□□ -1.21
SMARCA4P51532 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SMARCA4P51532 AC140134.1-201ENST00000511830 3544 ntBASIC7.48□□□□□ -1.21
SMARCA4P51532 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC7.48□□□□□ -1.21
SMARCA4P51532 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 AP001273.1-201ENST00000624493 3152 ntBASIC7.48□□□□□ -1.21
SMARCA4P51532 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.48□□□□□ -1.21
SMARCA4P51532 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SMARCA4P51532 AC010480.1-201ENST00000624823 684 ntBASIC7.48□□□□□ -1.21
SMARCA4P51532 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC7.48□□□□□ -1.21
SMARCA4P51532 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMARCA4P51532 AC032011.1-201ENST00000611703 1549 ntBASIC7.47□□□□□ -1.21
SMARCA4P51532 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SMARCA4P51532 RN7SKP141-201ENST00000516167 338 ntBASIC7.47□□□□□ -1.21
SMARCA4P51532 AC126323.6-202ENST00000568092 3511 ntBASIC7.47□□□□□ -1.21
SMARCA4P51532 AC110743.1-201ENST00000584870 478 ntBASIC7.47□□□□□ -1.21
SMARCA4P51532 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms