Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC093534.1-201ENST00000504977 132 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC096571.1-202ENST00000506634 735 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC010468.3-201ENST00000508225 458 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC6P09630 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HOXC6P09630 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC6P09630 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC6P09630 AP000827.1-201ENST00000527814 258 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HOXC6P09630 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.35□□□□□ -1.55
HOXC6P09630 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC6P09630 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC6P09630 AC007224.1-201ENST00000564410 144 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.35□□□□□ -1.55
HOXC6P09630 AC069366.1-201ENST00000583159 838 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.35□□□□□ -1.55
HOXC6P09630 MIR3138-201ENST00000585238 82 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC112220.2-201ENST00000605513 533 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC013244.3-201ENST00000605614 388 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 BX005214.3-202ENST00000619809 325 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AP000943.4-201ENST00000622912 357 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AL356863.1-201ENST00000623378 1080 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 AC011815.3-201ENST00000624194 473 ntBASIC5.35□□□□□ -1.55
HOXC6P09630 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC6P09630 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC6P09630 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.35□□□□□ -1.55
HOXC6P09630 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC6P09630 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HOXC6P09630 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC097063.1-201ENST00000426714 1797 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.34□□□□□ -1.55
HOXC6P09630 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 MAPK10-286ENST00000641208 8747 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AC005261.6-201ENST00000623072 1387 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 RPL23AP59-201ENST00000399415 461 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 ST13P16-201ENST00000401760 781 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 Z98745.1-201ENST00000402553 494 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC6P09630 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC013268.2-201ENST00000420753 337 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 TPTE2P3-201ENST00000441562 1189 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC6P09630 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC007016.1-201ENST00000512110 244 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC6P09630 OR8G5-201ENST00000524943 1041 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC093249.4-201ENST00000564755 259 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.34□□□□□ -1.55
HOXC6P09630 MTATP6P2-201ENST00000603319 678 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 AC090948.1-201ENST00000607464 549 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AL133243.1-201ENST00000614487 366 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AP005019.3-201ENST00000620418 560 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AP000648.2-201ENST00000624182 404 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 AC004808.1-201ENST00000627671 721 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 U3.53-201ENST00000628922 216 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 TMEM30CP-203ENST00000637814 1035 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.34□□□□□ -1.55
HOXC6P09630 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.34□□□□□ -1.55
HOXC6P09630 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HOXC6P09630 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.55
HOXC6P09630 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.34□□□□□ -1.56
HOXC6P09630 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
HOXC6P09630 SALL4P2-201ENST00000423288 2910 ntBASIC5.34□□□□□ -1.56
HOXC6P09630 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
HOXC6P09630 AC020633.1-201ENST00000468439 2247 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HOXC6P09630 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC6P09630 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HOXC6P09630 RNU6-1000P-201ENST00000391066 106 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL590762.2-201ENST00000395798 571 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL589994.1-201ENST00000404962 340 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AMZ2P2-201ENST00000406819 1057 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.33□□□□□ -1.56
HOXC6P09630 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.33□□□□□ -1.56
HOXC6P09630 AL645931.1-201ENST00000439737 410 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HOXC6P09630 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.33□□□□□ -1.56
HOXC6P09630 MTCO2P9-201ENST00000503214 694 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms