Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL442639.1-201ENST00000625030 1899 ntBASIC3.39□□□□□ -1.87
CXCL1P09341 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL1P09341 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 AC025031.4-201ENST00000621248 3271 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 BDP1P-201ENST00000582658 1990 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL1P09341 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CXCL1P09341 AC010132.2-201ENST00000295493 1043 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CXCL1P09341 RNU1-82P-201ENST00000390851 165 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 SEPT7P2-202ENST00000398921 823 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL1P09341 MIR1911-201ENST00000410783 80 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CXCL1P09341 AC099336.2-201ENST00000422457 254 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 MTCO1P51-201ENST00000427672 1060 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL1P09341 MYO5BP2-201ENST00000449815 1277 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 AC234781.3-201ENST00000452540 973 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 FABP3P2-201ENST00000453169 399 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.38□□□□□ -1.87
CXCL1P09341 AC099560.2-201ENST00000457554 255 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 MRPS33P2-201ENST00000507850 322 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 AC091868.1-201ENST00000508746 304 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 RNA5SP362-201ENST00000516048 118 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL1P09341 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 AC091515.1-201ENST00000548110 679 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL1P09341 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC3.38□□□□□ -1.87
CXCL1P09341 AL034351.1-201ENST00000605288 668 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 FAM27B-201ENST00000610601 213 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 AC138907.10-201ENST00000623708 983 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 AC139769.1-204ENST00000472297 1931 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 HSPD1P11-201ENST00000508643 1702 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 RPS4XP5-202ENST00000449995 1334 ntBASIC3.38□□□□□ -1.87
CXCL1P09341 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CXCL1P09341 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CXCL1P09341 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.38□□□□□ -1.87
CXCL1P09341 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CXCL1P09341 MFSD8-242ENST00000641690 4199 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AL589994.1-201ENST00000404962 340 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AL513325.1-201ENST00000417716 1034 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC011742.1-201ENST00000431448 434 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 RPS6P12-201ENST00000432491 726 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC009263.1-201ENST00000441193 1239 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL1P09341 AL035551.1-201ENST00000446931 348 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC243772.1-201ENST00000451620 410 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 RN7SL172P-201ENST00000460535 303 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 EIF2S2P4-201ENST00000461070 984 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 APOOP2-201ENST00000461561 539 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC016687.1-201ENST00000482574 353 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CXCL1P09341 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 SCARNA22-201ENST00000503991 125 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC010342.1-201ENST00000514047 877 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 MTATP6P1-201ENST00000514057 681 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL1P09341 IGKV2-18-201ENST00000522607 343 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.37□□□□□ -1.87
CXCL1P09341 MIR4644-201ENST00000579929 84 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AC011453.2-201ENST00000603737 729 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 Z82195.1-201ENST00000604558 398 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC015722.2-201ENST00000622210 551 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC3.37□□□□□ -1.87
CXCL1P09341 PHKBP1-201ENST00000450951 1951 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms