Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RNA5SP519-201ENST00000516480 119 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AP000859.1-201ENST00000525536 307 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC027176.2-201ENST00000559166 746 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC007066.2-202ENST00000566531 914 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 MIR7641-1-201ENST00000627518 61 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AC132825.8-201ENST00000640783 297 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AL596275.2-204ENST00000641628 552 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 AL596275.2-206ENST00000641957 626 ntBASIC4.34□□□□□ -1.71
HLA-DQB2P05538 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.34□□□□□ -1.71
HLA-DQB2P05538 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
HLA-DQB2P05538 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 OR4K17-201ENST00000315543 1032 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RNU1-132P-201ENST00000364300 164 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RNU4-25P-201ENST00000410569 230 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AL807761.1-201ENST00000417622 171 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RPL18P10-201ENST00000425606 538 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC023141.6-201ENST00000429418 337 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 GEMIN8P3-201ENST00000445417 720 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RPL23AP81-201ENST00000455252 467 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC041039.1-201ENST00000485656 536 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RPL35P6-201ENST00000490024 372 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 STMN1P2-201ENST00000508435 439 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 PGBD4P4-201ENST00000509673 613 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 C1GALT1P3-201ENST00000522049 819 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC009643.1-201ENST00000532030 391 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC011944.2-201ENST00000624440 683 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AC055839.1-201ENST00000634467 498 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 TMEM30CP-203ENST00000637814 1035 ntBASIC4.33□□□□□ -1.72
HLA-DQB2P05538 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.33□□□□□ -1.72
HLA-DQB2P05538 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 CCT8P1-201ENST00000413611 1657 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 TTC39DP-201ENST00000416781 1688 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC010132.2-201ENST00000295493 1043 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RBMY1KP-201ENST00000423480 476 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 SERPINA7P1-201ENST00000443077 631 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 TPT1P13-201ENST00000449760 499 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RPS26P28-201ENST00000470806 348 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC138409.2-202ENST00000507274 458 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 PPBPP1-201ENST00000510807 373 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC008958.1-201ENST00000511047 682 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC093840.1-201ENST00000511599 336 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RNA5SP73-201ENST00000516744 108 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 RAB9BP1-201ENST00000519581 626 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC034205.1-201ENST00000520621 638 ntBASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.32□□□□□ -1.72
HLA-DQB2P05538 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms