Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 AC091305.2-201ENST00000624049 1576 ntBASIC4.58□□□□□ -1.68
SNX3O60493 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SNX3O60493 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SNX3O60493 RNU4-31P-201ENST00000384211 141 ntBASIC4.58□□□□□ -1.68
SNX3O60493 RNU6-452P-201ENST00000384406 107 ntBASIC4.58□□□□□ -1.68
SNX3O60493 OR51B3P-201ENST00000412287 913 ntBASIC4.58□□□□□ -1.68
SNX3O60493 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 MTCO3P4-201ENST00000419236 787 ntBASIC4.58□□□□□ -1.68
SNX3O60493 FO393419.3-201ENST00000428741 282 ntBASIC4.58□□□□□ -1.68
SNX3O60493 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX3O60493 AC064862.4-201ENST00000442180 334 ntBASIC4.58□□□□□ -1.68
SNX3O60493 CASP3P1-201ENST00000446037 609 ntBASIC4.58□□□□□ -1.68
SNX3O60493 AC022431.1-201ENST00000450941 438 ntBASIC4.58□□□□□ -1.68
SNX3O60493 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX3O60493 RPL7AP52-201ENST00000458096 790 ntBASIC4.58□□□□□ -1.68
SNX3O60493 RPL7P48-201ENST00000461513 746 ntBASIC4.58□□□□□ -1.68
SNX3O60493 AC079804.1-201ENST00000461922 436 ntBASIC4.58□□□□□ -1.68
SNX3O60493 RN7SL547P-201ENST00000490793 290 ntBASIC4.58□□□□□ -1.68
SNX3O60493 RN7SL649P-201ENST00000496974 275 ntBASIC4.58□□□□□ -1.68
SNX3O60493 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 OR7E128P-201ENST00000532736 1024 ntBASIC4.58□□□□□ -1.68
SNX3O60493 TOMM20P1-201ENST00000534518 427 ntBASIC4.58□□□□□ -1.68
SNX3O60493 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX3O60493 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX3O60493 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 AC095055.1-201ENST00000603472 1113 ntBASIC4.58□□□□□ -1.68
SNX3O60493 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX3O60493 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX3O60493 AC010435.1-201ENST00000623353 1177 ntBASIC4.58□□□□□ -1.68
SNX3O60493 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX3O60493 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX3O60493 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
SNX3O60493 AC011266.1-201ENST00000624119 3569 ntBASIC4.58□□□□□ -1.68
SNX3O60493 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 OR4K17-201ENST00000315543 1032 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
SNX3O60493 SNORA17.1-201ENST00000362945 126 ntBASIC4.57□□□□□ -1.68
SNX3O60493 SNORA74A-201ENST00000364089 198 ntBASIC4.57□□□□□ -1.68
SNX3O60493 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 GCNT6-201ENST00000379591 934 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RNU6-225P-201ENST00000384613 103 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AL589647.1-201ENST00000402485 466 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.57□□□□□ -1.68
SNX3O60493 AC105402.1-201ENST00000413336 545 ntBASIC4.57□□□□□ -1.68
SNX3O60493 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.57□□□□□ -1.68
SNX3O60493 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.57□□□□□ -1.68
SNX3O60493 PNRC2P1-201ENST00000423940 420 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC073335.1-201ENST00000427776 363 ntBASIC4.57□□□□□ -1.68
SNX3O60493 NANOGP6-201ENST00000429190 847 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX3O60493 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 AL451050.1-201ENST00000450126 415 ntBASIC4.57□□□□□ -1.68
SNX3O60493 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX3O60493 RNU7-27P-201ENST00000459281 62 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RPL23AP56-201ENST00000460778 453 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RPL32P14-201ENST00000463196 378 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC097484.1-201ENST00000471148 389 ntBASIC4.57□□□□□ -1.68
SNX3O60493 CYCSP20-201ENST00000473154 315 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 RPL37P23-201ENST00000492641 294 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AC025164.1-201ENST00000496249 478 ntBASIC4.57□□□□□ -1.68
SNX3O60493 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX3O60493 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 C1DP5-201ENST00000525775 383 ntBASIC4.57□□□□□ -1.68
SNX3O60493 NANOGNBP2-201ENST00000544753 553 ntBASIC4.57□□□□□ -1.68
SNX3O60493 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.57□□□□□ -1.68
SNX3O60493 NPM1P47-201ENST00000560843 856 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms