Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC005229.2-201ENST00000456995 399 ntBASIC4.62□□□□□ -1.67
SSX4O60224 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AC108161.1-201ENST00000461060 402 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AP000942.1-201ENST00000463969 747 ntBASIC4.62□□□□□ -1.67
SSX4O60224 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 RPL21P6-201ENST00000479171 504 ntBASIC4.62□□□□□ -1.67
SSX4O60224 RN7SL814P-201ENST00000487715 300 ntBASIC4.62□□□□□ -1.67
SSX4O60224 HMGB1P38-201ENST00000490557 577 ntBASIC4.62□□□□□ -1.67
SSX4O60224 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AC069306.1-201ENST00000507006 843 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 MTND6P2-201ENST00000512226 524 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 RN7SKP66-201ENST00000516681 231 ntBASIC4.62□□□□□ -1.67
SSX4O60224 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AC107918.3-201ENST00000533272 382 ntBASIC4.62□□□□□ -1.67
SSX4O60224 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SSX4O60224 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 POLR2KP1-201ENST00000553226 168 ntBASIC4.62□□□□□ -1.67
SSX4O60224 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 OR11J2P-201ENST00000555298 907 ntBASIC4.62□□□□□ -1.67
SSX4O60224 YWHAZP1-201ENST00000556286 722 ntBASIC4.62□□□□□ -1.67
SSX4O60224 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 AC068714.1-201ENST00000559623 800 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 MIR4789-201ENST00000577469 82 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.62□□□□□ -1.67
SSX4O60224 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AP000919.1-202ENST00000581139 1264 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC4.62□□□□□ -1.67
SSX4O60224 AC096586.1-201ENST00000610267 561 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.62□□□□□ -1.67
SSX4O60224 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 AC015726.3-201ENST00000624501 418 ntBASIC4.62□□□□□ -1.67
SSX4O60224 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SSX4O60224 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
SSX4O60224 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SSX4O60224 HSPD1P14-201ENST00000432666 1618 ntBASIC4.61□□□□□ -1.67
SSX4O60224 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 RNF6P1-201ENST00000444889 1784 ntBASIC4.61□□□□□ -1.67
SSX4O60224 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 RNU6-543P-201ENST00000362576 108 ntBASIC4.61□□□□□ -1.67
SSX4O60224 MIR122-201ENST00000385044 85 ntBASIC4.61□□□□□ -1.67
SSX4O60224 SNORA68.2-201ENST00000391263 128 ntBASIC4.61□□□□□ -1.67
SSX4O60224 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.61□□□□□ -1.67
SSX4O60224 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 AC007161.1-204ENST00000423039 460 ntBASIC4.61□□□□□ -1.67
SSX4O60224 SEC63P1-201ENST00000425785 1258 ntBASIC4.61□□□□□ -1.67
SSX4O60224 RPL35AP21-201ENST00000437667 333 ntBASIC4.61□□□□□ -1.67
SSX4O60224 FABP5P3-201ENST00000437960 408 ntBASIC4.61□□□□□ -1.67
SSX4O60224 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 NOP56P2-201ENST00000447491 769 ntBASIC4.61□□□□□ -1.67
SSX4O60224 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.61□□□□□ -1.67
SSX4O60224 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SSX4O60224 RPL7P61-201ENST00000451721 751 ntBASIC4.61□□□□□ -1.67
SSX4O60224 GTF2IP12-201ENST00000456547 356 ntBASIC4.61□□□□□ -1.67
SSX4O60224 RPL23AP12-201ENST00000467573 473 ntBASIC4.61□□□□□ -1.67
SSX4O60224 METTL15P1-201ENST00000481421 1045 ntBASIC4.61□□□□□ -1.67
SSX4O60224 RPL7P40-201ENST00000481703 745 ntBASIC4.61□□□□□ -1.67
SSX4O60224 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 RNU6-941P-201ENST00000516346 108 ntBASIC4.61□□□□□ -1.67
SSX4O60224 RNU6-347P-201ENST00000516658 105 ntBASIC4.61□□□□□ -1.67
SSX4O60224 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX4O60224 AC138701.1-201ENST00000524329 714 ntBASIC4.61□□□□□ -1.67
SSX4O60224 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 AC011611.5-201ENST00000552477 578 ntBASIC4.61□□□□□ -1.67
SSX4O60224 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 AC027104.1-201ENST00000563702 681 ntBASIC4.61□□□□□ -1.67
SSX4O60224 AC010735.1-201ENST00000567305 1026 ntBASIC4.61□□□□□ -1.67
SSX4O60224 MIR4646-201ENST00000580775 63 ntBASIC4.61□□□□□ -1.67
SSX4O60224 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 MIR6798-201ENST00000612887 67 ntBASIC4.61□□□□□ -1.67
SSX4O60224 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 CYP4F35P-202ENST00000636121 390 ntBASIC4.61□□□□□ -1.67
SSX4O60224 U6.107-201ENST00000637108 79 ntBASIC4.61□□□□□ -1.67
SSX4O60224 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
SSX4O60224 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.61□□□□□ -1.67
SSX4O60224 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.61□□□□□ -1.67
SSX4O60224 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
SSX4O60224 AL645568.2-201ENST00000432815 1337 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms