Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 CFTRP2-201ENST00000634304 199 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 TLK1P1-201ENST00000456760 2440 ntBASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.13□□□□□ -1.75
RHBDD3Q9Y3P4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SKP104-201ENST00000362605 328 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-618P-201ENST00000363518 112 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RN7SKP199-201ENST00000410325 305 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00993-201ENST00000420453 540 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RPS12P5-201ENST00000423449 371 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 BTG3P1-201ENST00000435859 716 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 MTCYBP12-201ENST00000440559 1134 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC018638.3-201ENST00000461273 132 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RPL7AP6-201ENST00000477943 801 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 RPS4XP14-201ENST00000493072 781 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 BTF3P13-201ENST00000513224 490 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC110775.1-201ENST00000513721 462 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 SCARNA21.2-201ENST00000516600 166 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 OR5AN2P-201ENST00000534535 896 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC004232.3-201ENST00000622977 525 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC112694.2-201ENST00000623697 768 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 CR381572.2-201ENST00000624852 397 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 INTS6P1-201ENST00000504674 2530 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 AC087190.4-201ENST00000574616 8334 ntBASIC4.12□□□□□ -1.75
RHBDD3Q9Y3P4 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC027290.2-201ENST00000623210 18662 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC105074.1-201ENST00000623380 3095 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 SAMMSON-226ENST00000642089 1582 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 RNU6-670P-201ENST00000364312 104 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 MIR195-201ENST00000385194 87 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 MIR921-201ENST00000401133 56 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 SPTLC1P2-201ENST00000407089 121 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 Z68694.1-201ENST00000413929 841 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 OR2AM1P-201ENST00000422137 422 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC004448.2-201ENST00000422360 586 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 NDUFA5P1-201ENST00000433858 341 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC010733.1-201ENST00000451515 401 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC110749.1-201ENST00000462007 357 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 ATP5G1P3-201ENST00000463301 410 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 RPL23AP12-201ENST00000467573 473 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC104971.1-201ENST00000495117 578 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 GAPDHP56-201ENST00000506031 988 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 OR5M14P-201ENST00000506803 618 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 AC021146.3-201ENST00000511911 260 ntBASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.11□□□□□ -1.75
RHBDD3Q9Y3P4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms