Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RN7SL753P-201ENST00000581238 290 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AL022067.1-201ENST00000602426 454 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RPP40P2-201ENST00000603596 712 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC079395.2-201ENST00000610982 737 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 MIR6837-201ENST00000620884 64 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC006963.1-201ENST00000624003 1052 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 MTND5P11-201ENST00000511037 1812 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 AC126323.6-202ENST00000568092 3511 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 SCN1A-220ENST00000641603 12506 ntBASIC4.29□□□□□ -1.72
MRPS28Q9Y2Q9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AL121950.1-201ENST00000624993 2077 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC104118.1-201ENST00000607625 1589 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 DDX18P5-201ENST00000534547 1306 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MTCO1P11-201ENST00000429111 1528 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 ZNF29P-201ENST00000225587 168 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RNU5B-4P-201ENST00000363508 111 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 NCSTNP1-201ENST00000406229 144 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RNU4-74P-201ENST00000411280 161 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RPL26P37-201ENST00000411983 438 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 TATDN1P1-201ENST00000414123 891 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RPA2P2-201ENST00000419698 796 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 EIF4A1P1-201ENST00000420241 934 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC022022.1-201ENST00000430304 178 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MTCO1P43-201ENST00000431831 488 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC092162.1-201ENST00000432828 434 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 TMX2P1-201ENST00000436507 708 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MTND6P18-201ENST00000439477 513 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 ARF4P4-201ENST00000439608 520 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RPS29P9-201ENST00000440360 171 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 ELOCP13-201ENST00000443934 329 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC099063.2-201ENST00000446360 662 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RPS17P11-201ENST00000474297 293 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC020890.1-201ENST00000491837 504 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC010350.1-201ENST00000504908 231 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC093720.1-201ENST00000505681 714 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 SNORA19.3-201ENST00000516165 130 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC087894.1-201ENST00000538359 518 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC024940.3-201ENST00000538551 316 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC090888.2-201ENST00000559765 1144 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MIR4509-3-201ENST00000578671 94 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MIR4509-2-201ENST00000583920 94 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MIR6862-1-201ENST00000613016 70 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MIR6862-2-201ENST00000614755 70 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 MIR4509-1-201ENST00000618224 94 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC090527.3-201ENST00000619041 548 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC068787.1-201ENST00000623908 691 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC021106.3-201ENST00000623925 531 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC092159.4-201ENST00000624944 550 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC136428.4-201ENST00000634254 1155 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 AC006927.2-201ENST00000639256 389 ntBASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
MRPS28Q9Y2Q9 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms