Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 ATP5F1P2-201ENST00000398143 760 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 VN1R8P-201ENST00000407739 893 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL360081.1-201ENST00000428299 555 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL359265.2-201ENST00000434367 631 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC108463.1-201ENST00000450258 347 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 HMGB3P14-201ENST00000494195 599 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 RNU2-30P-201ENST00000516209 141 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 NPM1P52-201ENST00000518264 846 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC009303.3-201ENST00000591103 736 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 RMST_9.1-201ENST00000619945 193 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC091953.3-201ENST00000623220 236 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AP001784.1-201ENST00000624107 428 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC135352.1-201ENST00000506173 1418 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 ZNF137P-201ENST00000456718 1920 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 AC006971.1-201ENST00000407916 4486 ntBASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRAPPC4Q9Y296 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC107021.2-201ENST00000567714 2095 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 RN7SKP103-201ENST00000363848 320 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 RNU6-1263P-201ENST00000384601 106 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 MIR513A2-201ENST00000385249 127 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AL049745.1-201ENST00000433953 286 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC090013.1-201ENST00000485147 480 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 RPL36AP41-201ENST00000493820 306 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AK4P6-201ENST00000505168 528 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 OR7H2P-201ENST00000513483 306 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 HNRNPKP5-201ENST00000515300 253 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC107918.3-201ENST00000533272 382 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 MIR4270-201ENST00000581799 70 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC068790.5-201ENST00000602741 355 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC024940.4-201ENST00000605507 246 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC117490.2-201ENST00000610042 594 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AC097504.1-201ENST00000515103 2415 ntBASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.18□□□□□ -1.74
TRAPPC4Q9Y296 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 RN7SKP224-201ENST00000364140 325 ntBASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 RNA5SP22-201ENST00000365393 109 ntBASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.17□□□□□ -1.74
TRAPPC4Q9Y296 RN7SKP167-201ENST00000411047 285 ntBASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms