Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AP003175.1-201ENST00000641383 6658 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 RNU1-83P-201ENST00000363426 164 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 U1.1-201ENST00000384101 164 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC024023.1-201ENST00000624530 922 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 AC055839.1-201ENST00000634467 498 ntBASIC4.35□□□□□ -1.71
CHD7Q9P2D1 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 CASC19-204ENST00000641001 2055 ntBASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 RNA5SP22-201ENST00000365393 109 ntBASIC4.34□□□□□ -1.71
CHD7Q9P2D1 AC104306.1-201ENST00000449702 371 ntBASIC4.34□□□□□ -1.71
CHD7Q9P2D1 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 PPIAP15-201ENST00000479662 484 ntBASIC4.34□□□□□ -1.71
CHD7Q9P2D1 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD7Q9P2D1 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AL358472.1-201ENST00000431295 329 ntBASIC4.34□□□□□ -1.72
CHD7Q9P2D1 PRDX3P3-201ENST00000447765 522 ntBASIC4.34□□□□□ -1.72
CHD7Q9P2D1 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AC244505.7-201ENST00000599675 272 ntBASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AC114878.2-201ENST00000604863 1251 ntBASIC4.34□□□□□ -1.72
CHD7Q9P2D1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.34□□□□□ -1.72
CHD7Q9P2D1 FAM26E-201ENST00000368599 9784 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC104333.2-201ENST00000422630 192 ntBASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC007159.1-201ENST00000566529 4706 ntBASIC4.33□□□□□ -1.72
CHD7Q9P2D1 RPS4XP4-201ENST00000443195 763 ntBASIC4.33□□□□□ -1.72
CHD7Q9P2D1 RPS29P19-201ENST00000479709 171 ntBASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC079880.2-201ENST00000603790 1213 ntBASIC4.33□□□□□ -1.72
CHD7Q9P2D1 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CHD7Q9P2D1 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AC007066.1-201ENST00000392902 381 ntBASIC4.32□□□□□ -1.72
CHD7Q9P2D1 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AC092691.2-201ENST00000461787 803 ntBASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AC097486.1-201ENST00000515331 210 ntBASIC4.32□□□□□ -1.72
CHD7Q9P2D1 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AL360270.2-201ENST00000562952 5985 ntBASIC4.32□□□□□ -1.72
CHD7Q9P2D1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AL133244.1-201ENST00000456007 258 ntBASIC4.32□□□□□ -1.72
CHD7Q9P2D1 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.32□□□□□ -1.72
CHD7Q9P2D1 AC130352.1-201ENST00000602979 661 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms