Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC024405.1-201ENST00000532521 1042 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AL109766.1-201ENST00000555080 552 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC107958.1-201ENST00000556576 290 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC079075.1-201ENST00000559543 878 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC018558.5-201ENST00000565840 952 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC141257.3-201ENST00000572906 215 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AL953862.2-201ENST00000603089 820 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC023813.4-201ENST00000607580 580 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 MIR6780B-201ENST00000610307 79 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC023509.5-201ENST00000617434 807 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 AC022106.2-201ENST00000620114 757 ntBASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.88□□□□□ -1.31
CUEDC1Q9NWM3 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SPATA31C1-201ENST00000420021 3895 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC034111.1-201ENST00000562143 3770 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 MTCO1P12-201ENST00000414273 1543 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AL592429.1-201ENST00000403909 1473 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC016745.2-201ENST00000608834 3443 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-216P-201ENST00000363282 104 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC117470.1-201ENST00000381974 330 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-1106P-201ENST00000390845 107 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SNORD115.1-201ENST00000391109 76 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 FAUP2-201ENST00000394301 401 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 SUMO2P13-201ENST00000403109 272 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RNU2-3P-201ENST00000410144 191 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC244452.1-201ENST00000413798 141 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RPS27AP6-201ENST00000427962 448 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RPL31P35-201ENST00000431058 377 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 ANXA2P2-201ENST00000435128 1020 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RNU6-1208P-201ENST00000459588 107 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC010307.1-201ENST00000467206 836 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 CBX5P1-201ENST00000468470 561 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC012123.2-201ENST00000485809 248 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 NACAP6-201ENST00000509572 622 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RN7SKP70-201ENST00000516655 271 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC008429.4-201ENST00000521201 182 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC126177.6-201ENST00000550420 1009 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC138207.8-204ENST00000579588 527 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 CYP2C61P-201ENST00000604072 290 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AC099654.6-201ENST00000636487 512 ntBASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC6.87□□□□□ -1.31
CUEDC1Q9NWM3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms