Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC104164.2-201ENST00000496953 495 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC093890.1-201ENST00000502554 540 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 IGLV3-26-201ENST00000520756 302 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.58□□□□□ -1.68
CISHQ9NSE2 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 AC008013.2-202ENST00000637965 364 ntBASIC4.58□□□□□ -1.68
CISHQ9NSE2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CISHQ9NSE2 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CISHQ9NSE2 CCT8P1-201ENST00000413611 1657 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 RN7SKP235-201ENST00000410662 305 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 RN7SKP216-201ENST00000411050 312 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 P2RY10P2-201ENST00000416730 913 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 GNG5P5-201ENST00000420444 220 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 RBMY1KP-201ENST00000423480 476 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC073143.1-201ENST00000436316 395 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC079804.1-201ENST00000461922 436 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 RN7SL481P-201ENST00000477764 299 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 RPL35P6-201ENST00000490024 372 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 RNA5SP49-201ENST00000516450 115 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 RNA5SP73-201ENST00000516744 108 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 AP000859.1-201ENST00000525536 307 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 PSMB7P1-201ENST00000556349 514 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 MIR4284-201ENST00000578924 81 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC114781.5-201ENST00000615297 108 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AP000843.1-201ENST00000624880 701 ntBASIC4.57□□□□□ -1.68
CISHQ9NSE2 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
CISHQ9NSE2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CISHQ9NSE2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 CDC27P2-201ENST00000425026 1922 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC126755.2-208ENST00000327792 462 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC138969.1-213ENST00000331436 462 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 RNU1-14P-201ENST00000362759 152 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 RPL6P29-201ENST00000414863 865 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AL161631.1-201ENST00000417933 486 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 PRELID3BP10-201ENST00000431957 584 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 ACTR3P2-201ENST00000439585 1257 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 H2AFZP6-201ENST00000444403 394 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC041039.1-201ENST00000485656 536 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC108145.1-201ENST00000503770 153 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AL592156.1-201ENST00000508758 304 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC008958.1-201ENST00000511047 682 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 RNA5SP519-201ENST00000516480 119 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC018552.1-201ENST00000562099 811 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 AP001273.1-201ENST00000624493 3152 ntBASIC4.56□□□□□ -1.68
CISHQ9NSE2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.56□□□□□ -1.68
CISHQ9NSE2 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CISHQ9NSE2 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms