Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 AC010266.2-201ENST00000564741 3255 ntBASIC5.21□□□□□ -1.58
AMBRA1Q9C0C7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 TCP11X1-202ENST00000622971 1372 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 FAM3C2-201ENST00000312214 681 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 GAPDHP24-201ENST00000328713 983 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MIR105-2-201ENST00000385083 81 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC093719.1-202ENST00000392735 373 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 GSTA8P-201ENST00000404253 637 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL031779.1-201ENST00000415663 330 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RPL21P43-201ENST00000425440 472 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PRUNEP1-201ENST00000425846 705 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL121776.1-201ENST00000429337 372 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC126120.1-201ENST00000431082 470 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL354941.1-201ENST00000438600 464 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MTCYBP34-201ENST00000439552 670 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RHEBP2-201ENST00000450289 600 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MTCO3P16-201ENST00000454456 754 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC011476.1-201ENST00000466725 307 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RPL32P33-201ENST00000487023 394 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MTND5P13-201ENST00000513046 1079 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-759P-201ENST00000516740 103 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC021678.3-201ENST00000517893 476 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC112191.2-201ENST00000522428 333 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 RN7SL290P-201ENST00000578661 300 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MIR4260-201ENST00000583107 67 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 MIR4999-201ENST00000585029 91 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC125494.2-201ENST00000602431 657 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL590229.1-201ENST00000603497 542 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 BNIP3P4-201ENST00000604946 565 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AL512624.1-201ENST00000613638 469 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PWAR1-201ENST00000624188 2414 ntBASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
AMBRA1Q9C0C7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 MTCO1P6-201ENST00000481192 1384 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL022393.1-201ENST00000625142 1677 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 Y_RNA.77-201ENST00000362962 107 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms