Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC012519.1-201ENST00000424588 610 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 Z93242.1-201ENST00000427102 353 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 NPM1P22-201ENST00000427761 952 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 GAPDHP19-201ENST00000431768 1005 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 TXNP5-201ENST00000441043 315 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RPS7P5-201ENST00000441482 581 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 CYCSP24-201ENST00000445119 316 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 RPL12P26-201ENST00000452430 487 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 NDUFA12P1-201ENST00000455914 406 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RPL7P1-201ENST00000468161 747 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RPL7P9-201ENST00000468715 747 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 SETP11-201ENST00000473027 690 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 ACTG1P13-201ENST00000486987 1043 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC068724.1-201ENST00000487100 792 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RPL15P21-201ENST00000495592 567 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
LITAFQ99732 NIFKP7-201ENST00000503365 834 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC010409.2-201ENST00000505780 478 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC010424.1-201ENST00000506336 297 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 IGBP1P5-201ENST00000507524 1000 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 MINOS1P4-201ENST00000515470 318 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RNU6-678P-201ENST00000516832 109 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC125612.1-201ENST00000547580 377 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AL391156.1-201ENST00000554965 554 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 AP001094.1-201ENST00000579805 193 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC090312.2-201ENST00000582687 378 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 RSL24D1P11-201ENST00000591045 491 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 WISP1-OT1-201ENST00000602893 642 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LITAFQ99732 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 MBD5-221ENST00000637159 902 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC3.69□□□□□ -1.82
LITAFQ99732 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LITAFQ99732 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
LITAFQ99732 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LITAFQ99732 AC092104.1-201ENST00000497346 1441 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 AC073429.2-201ENST00000569694 1444 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 PWAR1-201ENST00000624188 2414 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC011477.1-204ENST00000623416 1325 ntBASIC3.69□□□□□ -1.82
LITAFQ99732 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LITAFQ99732 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC3.69□□□□□ -1.82
LITAFQ99732 AC009220.2-201ENST00000489759 1751 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.68□□□□□ -1.82
LITAFQ99732 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LITAFQ99732 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 RNU1-134P-201ENST00000362935 165 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RNU6-621P-201ENST00000364752 109 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RNA5SP85-201ENST00000365378 119 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 OR52E6-202ENST00000379946 954 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 SNORD94-201ENST00000386037 137 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 SNORA26.8-201ENST00000391306 124 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL161909.1-201ENST00000397390 712 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 FABP12P1-201ENST00000401911 322 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LITAFQ99732 HIST1H3PS1-201ENST00000404612 417 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RPA3-204ENST00000406109 434 ntTSL 3 BASIC3.68□□□□□ -1.82
LITAFQ99732 Y_RNA.619-201ENST00000410951 90 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RNA5SP155-201ENST00000411154 129 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 RN7SKP273-201ENST00000411392 314 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL390774.1-201ENST00000411924 246 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AL445213.1-201ENST00000412589 747 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 AC007738.1-201ENST00000413892 348 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MRPL53P1-201ENST00000414323 319 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 MTCO3P41-201ENST00000414801 328 ntBASIC3.68□□□□□ -1.82
LITAFQ99732 OR2AH1P-201ENST00000425717 928 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms