Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 S100A11P1-201ENST00000477525 312 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SNORD116-26-201ENST00000516006 96 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RN7SKP276-201ENST00000516242 268 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 RPL21P7-201ENST00000557463 483 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AL391358.1-201ENST00000605342 190 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC034236.3-201ENST00000605999 461 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC008966.2-201ENST00000606157 453 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AL592494.3-201ENST00000609485 464 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC015922.4-201ENST00000612568 690 ntBASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLHC1Q8NHS4 AC135352.1-201ENST00000506173 1418 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RNA5SP113-201ENST00000410486 84 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC140479.3-201ENST00000418944 1126 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AL138785.1-201ENST00000425821 331 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RPS6P12-201ENST00000432491 726 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC005008.1-201ENST00000456151 612 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 ZFRP1-201ENST00000457579 2970 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RPL7AP52-201ENST00000458096 790 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC104763.1-201ENST00000475274 360 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RN7SL177P-201ENST00000476596 299 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 RPL7P16-201ENST00000479738 738 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AK4P6-201ENST00000505168 528 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 SOX5P1-201ENST00000524155 1127 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 MIR4716-201ENST00000579628 84 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 NPM1P45-201ENST00000583151 559 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC103792.1-201ENST00000603591 919 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC019131.2-201ENST00000609071 870 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 SDR42E1P1-201ENST00000611327 477 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC090510.2-201ENST00000617465 629 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC007342.7-201ENST00000624610 2337 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 AC012020.1-201ENST00000624541 1728 ntBASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.38□□□□□ -1.71
CLHC1Q8NHS4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 CR788268.1-201ENST00000603931 1809 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 AL590240.1-201ENST00000334118 313 ntBASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.37□□□□□ -1.71
CLHC1Q8NHS4 RNU6-167P-201ENST00000384292 106 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms