Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USP41Q3LFD5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.22□□□□□ -1.57
USP41Q3LFD5 AL672167.1-204ENST00000641875 3017 ntBASIC5.22□□□□□ -1.57
USP41Q3LFD5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.22□□□□□ -1.57
USP41Q3LFD5 MTCO1P4-201ENST00000520516 1409 ntBASIC5.22□□□□□ -1.57
USP41Q3LFD5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.22□□□□□ -1.57
USP41Q3LFD5 AC112198.2-201ENST00000426589 6996 ntBASIC5.22□□□□□ -1.57
USP41Q3LFD5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
USP41Q3LFD5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
USP41Q3LFD5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP41Q3LFD5 RNU6-925P-201ENST00000384629 104 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 RPS3AP23-201ENST00000401762 784 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 SNORA79B-201ENST00000410557 148 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 RPL12P9-201ENST00000412942 488 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 PCNPP4-201ENST00000414817 517 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 TBCAP2-201ENST00000416175 326 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC012519.1-201ENST00000424588 610 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 OR2B7P-201ENST00000429302 934 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 RNA5SP103-201ENST00000459503 118 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC107015.1-201ENST00000466902 747 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC093720.1-201ENST00000505681 714 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC100784.1-201ENST00000522790 310 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 SETP1-201ENST00000556014 845 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC209154.1-201ENST00000582156 337 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 RN7SL435P-201ENST00000584418 282 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC011458.1-201ENST00000604034 617 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC098935.2-201ENST00000604222 466 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 SUMO2P14-201ENST00000604488 293 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AL135786.2-201ENST00000608422 615 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AP001033.2-201ENST00000609701 1003 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 MIR6853-201ENST00000619642 74 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 AC022106.2-201ENST00000620114 757 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP41Q3LFD5 AL022322.2-201ENST00000624072 20397 ntBASIC5.21□□□□□ -1.58
USP41Q3LFD5 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
USP41Q3LFD5 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USP41Q3LFD5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
USP41Q3LFD5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 SNORA73.1-201ENST00000363107 205 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 RNU4-7P-201ENST00000364758 141 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC069213.2-201ENST00000420238 366 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 CALM1P2-201ENST00000452941 448 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 RPL32P14-201ENST00000463196 378 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 ATP5G1P3-201ENST00000463301 410 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 NDUFA5P9-201ENST00000472609 340 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 IGHV3-63-201ENST00000518422 341 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 RN7SL690P-201ENST00000582087 240 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AP003117.1-201ENST00000602771 554 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC005034.4-201ENST00000603612 899 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC079880.2-201ENST00000603790 1213 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC026741.1-201ENST00000605892 482 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC010424.2-201ENST00000607594 443 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AL391834.2-201ENST00000609982 546 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 FAM27B-201ENST00000610601 213 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC012414.7-202ENST00000622705 1090 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 AC021106.3-201ENST00000623925 531 ntBASIC5.2□□□□□ -1.58
USP41Q3LFD5 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP41Q3LFD5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.2□□□□□ -1.58
USP41Q3LFD5 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms