Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNU6-729P-201ENST00000384399 107 ntBASIC4.56□□□□□ -1.68
CDH11P55287 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH11P55287 AC233289.1-201ENST00000403700 508 ntBASIC4.56□□□□□ -1.68
CDH11P55287 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 TMBIM7P-201ENST00000418074 855 ntBASIC4.56□□□□□ -1.68
CDH11P55287 SFR1P2-201ENST00000421841 730 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AL450263.2-201ENST00000439400 589 ntBASIC4.56□□□□□ -1.68
CDH11P55287 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 HMGB1P26-201ENST00000452520 628 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC002553.2-201ENST00000453217 340 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 RPS20P4-201ENST00000461659 355 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH11P55287 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH11P55287 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH11P55287 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AP000676.2-201ENST00000529711 301 ntBASIC4.56□□□□□ -1.68
CDH11P55287 EIF4A2P5-201ENST00000529914 499 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC005868.1-201ENST00000536421 331 ntBASIC4.56□□□□□ -1.68
CDH11P55287 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 CD24P2-201ENST00000565486 219 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH11P55287 AC023825.1-201ENST00000566704 1030 ntBASIC4.56□□□□□ -1.68
CDH11P55287 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.56□□□□□ -1.68
CDH11P55287 AC008507.2-201ENST00000588402 1176 ntBASIC4.56□□□□□ -1.68
CDH11P55287 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 AP002799.1-201ENST00000623552 423 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC021106.3-201ENST00000623925 531 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AP003476.1-201ENST00000623984 516 ntBASIC4.56□□□□□ -1.68
CDH11P55287 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
CDH11P55287 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.56□□□□□ -1.68
CDH11P55287 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.56□□□□□ -1.68
CDH11P55287 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CDH11P55287 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.56□□□□□ -1.68
CDH11P55287 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDH11P55287 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 AC097461.1-201ENST00000568928 2821 ntBASIC4.55□□□□□ -1.68
CDH11P55287 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDH11P55287 RN7SKP113-201ENST00000363891 295 ntBASIC4.55□□□□□ -1.68
CDH11P55287 SNORA72.3-201ENST00000365074 132 ntBASIC4.55□□□□□ -1.68
CDH11P55287 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 RNU6-468P-201ENST00000384003 109 ntBASIC4.55□□□□□ -1.68
CDH11P55287 RNU6-207P-201ENST00000384137 107 ntBASIC4.55□□□□□ -1.68
CDH11P55287 MIR600-201ENST00000385007 98 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 AC011242.1-201ENST00000433596 1158 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 AL772161.1-201ENST00000439130 476 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC092647.3-201ENST00000443044 633 ntBASIC4.55□□□□□ -1.68
CDH11P55287 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 OTX2P1-201ENST00000450956 354 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 CYCSP34-201ENST00000458172 304 ntBASIC4.55□□□□□ -1.68
CDH11P55287 RN7SL443P-201ENST00000464331 290 ntBASIC4.55□□□□□ -1.68
CDH11P55287 AC112206.1-201ENST00000468416 477 ntBASIC4.55□□□□□ -1.68
CDH11P55287 RPS23P1-201ENST00000491662 432 ntBASIC4.55□□□□□ -1.68
CDH11P55287 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.55□□□□□ -1.68
CDH11P55287 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 AC069306.1-201ENST00000507006 843 ntBASIC4.55□□□□□ -1.68
CDH11P55287 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.55□□□□□ -1.68
CDH11P55287 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms