Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR10AB1P-202ENST00000641219 1686 ntBASIC4.99□□□□□ -1.61
SSR1P43307 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.99□□□□□ -1.61
SSR1P43307 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.99□□□□□ -1.61
SSR1P43307 RNU1-108P-201ENST00000362556 161 ntBASIC4.99□□□□□ -1.61
SSR1P43307 RNU1-83P-201ENST00000363426 164 ntBASIC4.99□□□□□ -1.61
SSR1P43307 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 AC096644.3-201ENST00000416788 338 ntBASIC4.99□□□□□ -1.61
SSR1P43307 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 LINC00993-201ENST00000420453 540 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AC093698.1-201ENST00000423843 571 ntBASIC4.99□□□□□ -1.61
SSR1P43307 FABP7P2-201ENST00000429946 379 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.99□□□□□ -1.61
SSR1P43307 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AC239809.1-201ENST00000450470 217 ntBASIC4.99□□□□□ -1.61
SSR1P43307 MTND6P6-201ENST00000478031 263 ntBASIC4.99□□□□□ -1.61
SSR1P43307 DEFB109F-201ENST00000491870 277 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 BTF3P13-201ENST00000513224 490 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 SMARCE1P4-201ENST00000523647 241 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 TOMM20P2-201ENST00000540082 421 ntBASIC4.99□□□□□ -1.61
SSR1P43307 HMGN2P6-201ENST00000551091 273 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.99□□□□□ -1.61
SSR1P43307 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.99□□□□□ -1.61
SSR1P43307 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.99□□□□□ -1.61
SSR1P43307 MIR4644-201ENST00000579929 84 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AC022726.1-201ENST00000587475 207 ntBASIC4.99□□□□□ -1.61
SSR1P43307 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 AC110741.2-201ENST00000605278 268 ntBASIC4.99□□□□□ -1.61
SSR1P43307 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.99□□□□□ -1.61
SSR1P43307 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.99□□□□□ -1.61
SSR1P43307 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 IRF5P1-201ENST00000504852 2164 ntBASIC4.99□□□□□ -1.61
SSR1P43307 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SSR1P43307 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SSR1P43307 AL133268.1-201ENST00000405676 1401 ntBASIC4.98□□□□□ -1.61
SSR1P43307 RARSP1-201ENST00000542842 1418 ntBASIC4.98□□□□□ -1.61
SSR1P43307 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.98□□□□□ -1.61
SSR1P43307 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.98□□□□□ -1.61
SSR1P43307 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SSR1P43307 U3.30-201ENST00000391308 210 ntBASIC4.98□□□□□ -1.61
SSR1P43307 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 MIR1178-201ENST00000408396 91 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC114755.2-201ENST00000413520 361 ntBASIC4.98□□□□□ -1.61
SSR1P43307 RAB9AP4-201ENST00000415230 609 ntBASIC4.98□□□□□ -1.61
SSR1P43307 OR2B7P-201ENST00000429302 934 ntBASIC4.98□□□□□ -1.61
SSR1P43307 RPS26P2-201ENST00000440331 348 ntBASIC4.98□□□□□ -1.61
SSR1P43307 TRY2P-201ENST00000448860 689 ntBASIC4.98□□□□□ -1.61
SSR1P43307 HIGD1AP8-201ENST00000453927 274 ntBASIC4.98□□□□□ -1.61
SSR1P43307 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 AC018638.3-201ENST00000461273 132 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC110749.1-201ENST00000462007 357 ntBASIC4.98□□□□□ -1.61
SSR1P43307 RN7SL808P-201ENST00000496066 299 ntBASIC4.98□□□□□ -1.61
SSR1P43307 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.98□□□□□ -1.61
SSR1P43307 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 OR5M14P-201ENST00000506803 618 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AL592156.1-201ENST00000508758 304 ntBASIC4.98□□□□□ -1.61
SSR1P43307 RNA5SP154-201ENST00000516193 111 ntBASIC4.98□□□□□ -1.61
SSR1P43307 OR8X1P-201ENST00000534542 869 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC005000.1-201ENST00000536192 288 ntBASIC4.98□□□□□ -1.61
SSR1P43307 GSTP1P1-201ENST00000548078 319 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.98□□□□□ -1.61
SSR1P43307 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 AC011487.3-201ENST00000593607 453 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.98□□□□□ -1.61
SSR1P43307 AP005212.4-201ENST00000614206 710 ntBASIC4.98□□□□□ -1.61
SSR1P43307 AC011815.3-201ENST00000624194 473 ntBASIC4.98□□□□□ -1.61
SSR1P43307 CFTRP2-201ENST00000634304 199 ntBASIC4.98□□□□□ -1.61
SSR1P43307 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSR1P43307 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSR1P43307 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.98□□□□□ -1.61
SSR1P43307 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSR1P43307 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SSR1P43307 AC109780.1-201ENST00000451768 1344 ntBASIC4.97□□□□□ -1.61
SSR1P43307 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SSR1P43307 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.97□□□□□ -1.61
SSR1P43307 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms