Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC011447.7-201ENST00000624228 1590 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL133268.1-201ENST00000405676 1401 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 VN2R3P-201ENST00000422626 1412 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 SNURFL-201ENST00000309296 343 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 RNA5SP27-201ENST00000363839 119 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC092642.1-201ENST00000392417 425 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AP000357.1-201ENST00000409926 1165 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 RNA5SP498-201ENST00000411342 120 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC092638.1-201ENST00000411966 1275 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTND4P3-201ENST00000417829 541 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 OR6K4P-201ENST00000423179 955 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTCO2P20-201ENST00000437339 673 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTCYBP31-201ENST00000438855 1122 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 PTGES3P1-201ENST00000439531 483 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL450023.3-201ENST00000440592 271 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 CR769776.1-201ENST00000441254 787 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 TCEA1P1-201ENST00000449716 880 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 OR51B8P-201ENST00000449892 769 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 ZNF886P-201ENST00000450781 723 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 IGHV5-78-201ENST00000450948 295 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 RBMY2TP-201ENST00000451162 947 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL691482.1-201ENST00000453255 87 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 OR2AF1P-201ENST00000454899 889 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 HMGB1P4-201ENST00000455362 567 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC097484.1-201ENST00000471148 389 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC090114.3-201ENST00000479267 829 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTCO3P35-201ENST00000485582 781 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC079203.1-201ENST00000487972 404 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTND4LP2-201ENST00000502312 285 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC011411.1-201ENST00000509592 876 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC012339.2-201ENST00000523996 453 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 MIR3691-201ENST00000578066 90 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC011472.4-201ENST00000615848 491 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 AC011330.2-201ENST00000621680 635 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 MTND2P41-201ENST00000637599 773 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 AL590763.1-201ENST00000398297 1545 ntBASIC4.5□□□□□ -1.69
HLA-DOBP13765 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
HLA-DOBP13765 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DOBP13765 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 CIR1P2-201ENST00000514821 1342 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DOBP13765 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 ANKRD36P1-201ENST00000344424 659 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNU6-666P-201ENST00000363499 107 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNU4-28P-201ENST00000364739 141 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNU1-106P-201ENST00000384382 164 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNU6-729P-201ENST00000384399 107 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 SNORA70.10-201ENST00000384515 134 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNU6-244P-201ENST00000391028 104 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 RPS27AP11-201ENST00000402798 447 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RN7SKP97-201ENST00000410966 333 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 RPL22P18-201ENST00000417197 377 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC013429.2-201ENST00000418798 781 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC005005.2-201ENST00000420779 380 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AC104333.2-201ENST00000422630 192 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DOBP13765 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms