Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 SNORD113-6-201ENST00000363345 75 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 SNORA16A-201ENST00000384342 137 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 MIR551A-201ENST00000385042 96 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.39□□□□□ -1.55
PHGDHO43175 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 AKR1B10P1-201ENST00000425765 942 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 EEF1B2P6-201ENST00000445713 673 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 Z83846.1-201ENST00000446798 265 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC090804.1-201ENST00000448870 490 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC104306.1-201ENST00000449702 371 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AL450023.1-201ENST00000450868 751 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 ANKRD26P4-201ENST00000455755 950 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 RPL37P3-201ENST00000456825 293 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.39□□□□□ -1.55
PHGDHO43175 EIF3LP3-201ENST00000495197 822 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.39□□□□□ -1.55
PHGDHO43175 AP000926.4-201ENST00000527351 454 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 NBEAP1-201ENST00000554452 979 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.39□□□□□ -1.55
PHGDHO43175 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 AL137072.1-201ENST00000603444 466 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC244107.2-201ENST00000611773 76 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC243654.2-201ENST00000612843 443 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 AC131159.1-201ENST00000621854 213 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PHGDHO43175 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.39□□□□□ -1.55
PHGDHO43175 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.39□□□□□ -1.55
PHGDHO43175 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 AC093775.1-201ENST00000624154 1868 ntBASIC5.39□□□□□ -1.55
PHGDHO43175 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PHGDHO43175 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC092079.1-201ENST00000558620 1985 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 ECM1P2-201ENST00000503354 1577 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AL450345.1-202ENST00000605741 3881 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC112198.2-201ENST00000426589 6996 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PHGDHO43175 RNU6-249P-201ENST00000363016 102 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 Y_RNA.192-201ENST00000363977 102 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 RN7SKP6-201ENST00000364795 319 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PHGDHO43175 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.38□□□□□ -1.55
PHGDHO43175 DPRXP1-201ENST00000426312 460 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 RPL7AP49-201ENST00000429522 581 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 MTCO1P54-201ENST00000430139 712 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 AL591438.1-201ENST00000433508 581 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 RPL19P16-201ENST00000433839 588 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 RPL23AP76-201ENST00000441860 458 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC104978.1-201ENST00000449387 391 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 MYO5BP2-201ENST00000449815 1277 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC234781.3-201ENST00000452540 973 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 ATG12P2-201ENST00000456830 416 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 NDUFB4P12-201ENST00000513465 390 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 MTND2P26-201ENST00000528255 1029 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC005363.1-201ENST00000530779 351 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC079600.1-201ENST00000550326 297 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms